Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_A16
         (934 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   3.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   7.9  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   7.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +1

Query: 616 IKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPL 732
           + IP      +  C     DP    DT PP+   E+ P+
Sbjct: 414 LTIPVSISLLIAACGLRNGDPCFFHDTIPPYLFFESPPV 452


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +1

Query: 616 IKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPL 732
           + IP      +  C     DP    DT PP+   E+ P+
Sbjct: 414 LTIPVSISLLIAACGLRNGDPCFFHDTIPPYLFFESPPV 452


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +1

Query: 616 IKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPL 732
           + IP      +  C     DP    DT PP+   E+ P+
Sbjct: 414 LTIPVSISLLIAACGLRNGDPCFFHDTIPPYLFFESPPV 452


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +1

Query: 616 IKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPL 732
           + IP      +  C     DP    DT PP+   E+ P+
Sbjct: 414 LTIPVSISLLIAACGLRNGDPCFFHDTIPPYLFFESPPV 452


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 287 EVFSALMNRPTRGERRFAYWAL 352
           EV  ALM+R   GERRF++ AL
Sbjct: 92  EVHEALMSR---GERRFSHKAL 110


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 287 EVFSALMNRPTRGERRFAYWAL 352
           EV  ALM+R   GERRF++ AL
Sbjct: 252 EVHEALMSR---GERRFSHKAL 270


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 287 EVFSALMNRPTRGERRFAYWAL 352
           EV  ALM+R   GERRF++ AL
Sbjct: 252 EVHEALMSR---GERRFSHKAL 270


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 161 KKCFICEICDAIALFVTIISCNKQVN 238
           K C +C+  + I  F+ II C  Q N
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFN 547


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +1

Query: 649 PPCRSPXSDPARLPDTCP 702
           P C  P   P R   TCP
Sbjct: 92  PTCDEPVHRPGRCCKTCP 109


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 194 IALFVTIISCNKQVNNNNCIHFMFQ 268
           +A+F+    C++    +NC+   FQ
Sbjct: 327 LAIFILYFICDEAHYASNCLRVQFQ 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,474
Number of Sequences: 336
Number of extensions: 2923
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)