Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A16
(934 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens ... 37 0.091
BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein. 37 0.12
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein. 37 0.12
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein. 37 0.12
AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein. 34 0.64
X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein. 34 0.85
U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding prot... 34 0.85
BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II... 34 0.85
AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II... 34 0.85
AB183864-1|BAD86792.1| 1271|Homo sapiens diacylglycerol kinase k... 34 0.85
AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein. 34 0.85
AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein. 34 0.85
AB005297-1|BAA23647.1| 1584|Homo sapiens BAI 1 protein. 33 1.5
BC033513-1|AAH33513.1| 265|Homo sapiens Unknown (protein for IM... 33 2.0
X14487-1|CAA32649.1| 593|Homo sapiens protein ( Human gene for ... 32 3.4
M99061-1|AAC83410.1| 645|Homo sapiens epidermal cytokeratin 2 p... 32 3.4
BC101149-1|AAI01150.1| 128|Homo sapiens keratin associated prot... 32 3.4
BC101148-1|AAI01149.1| 128|Homo sapiens keratin associated prot... 32 3.4
BC101147-1|AAI01148.1| 128|Homo sapiens keratin associated prot... 32 3.4
BC099644-1|AAH99644.1| 639|Homo sapiens keratin 2 (epidermal ic... 32 3.4
BC099643-1|AAH99643.1| 639|Homo sapiens keratin 2 (epidermal ic... 32 3.4
BC096294-1|AAH96294.1| 639|Homo sapiens keratin 2 (epidermal ic... 32 3.4
BC063625-1|AAH63625.1| 128|Homo sapiens KRTAP2-4 protein protein. 32 3.4
AJ406930-1|CAC27569.1| 128|Homo sapiens keratin associated prot... 32 3.4
AJ302536-1|CAC27564.1| 85|Homo sapiens keratin associated prot... 32 3.4
AJ296345-1|CAC24555.1| 96|Homo sapiens keratin associated prot... 32 3.4
AF019084-1|AAB81946.1| 645|Homo sapiens keratin 2e protein. 32 3.4
Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein. 31 4.5
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi... 31 4.5
BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating p... 31 6.0
AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein pr... 31 6.0
AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens ... 31 6.0
AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens ... 31 6.0
AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens ... 31 6.0
AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein. 31 6.0
AK097179-1|BAC04972.1| 549|Homo sapiens protein ( Homo sapiens ... 31 7.9
>AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ46366 fis, clone TESTI4051388. ).
Length = 286
Score = 37.1 bits (82), Expect = 0.091
Identities = 28/73 (38%), Positives = 32/73 (43%)
Frame = +1
Query: 550 RPPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXP 729
RPP RAS T A P RT P P + PP SP P R T PP +
Sbjct: 29 RPPTRASP--TRMPPRASPTRTP--PRASPRRTPPRASPRRTPPRASLTRPP-TRAPPTR 83
Query: 730 LPXTSPCTXLXPT 768
+P T+P T PT
Sbjct: 84 MPPTAPPTRTPPT 96
Score = 31.1 bits (67), Expect = 6.0
Identities = 26/73 (35%), Positives = 29/73 (39%)
Frame = +1
Query: 550 RPPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXP 729
R P RAS + T A P R P P + PP SP P R T P + A
Sbjct: 173 RTPPRASPRRTPPR--ASPTRAP--PRASPKRTPPTASPTRTPPRASPTRTPPTESPART 228
Query: 730 LPXTSPCTXLXPT 768
P SP T PT
Sbjct: 229 PPRASP-TRTPPT 240
>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
Length = 1481
Score = 36.7 bits (81), Expect = 0.12
Identities = 26/74 (35%), Positives = 29/74 (39%)
Frame = +1
Query: 562 RASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPLPXT 741
R S+ LK E+ P T P LP SP P LP T PP + PLP
Sbjct: 501 RDSKPIALKEEIVTPKETETSEKETPPPLPTIASP---PPPLPTTTPP---PQTPPLPPL 554
Query: 742 SPCTXLXPTPXLAP 783
P L P L P
Sbjct: 555 PPIPALPQQPPLPP 568
>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
Length = 1490
Score = 36.7 bits (81), Expect = 0.12
Identities = 26/74 (35%), Positives = 29/74 (39%)
Frame = +1
Query: 562 RASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPLPXT 741
R S+ LK E+ P T P LP SP P LP T PP + PLP
Sbjct: 501 RDSKPIALKEEIVTPKETETSEKETPPPLPTIASP---PPPLPTTTPP---PQTPPLPPL 554
Query: 742 SPCTXLXPTPXLAP 783
P L P L P
Sbjct: 555 PPIPALPQQPPLPP 568
>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
Length = 1535
Score = 36.7 bits (81), Expect = 0.12
Identities = 26/74 (35%), Positives = 29/74 (39%)
Frame = +1
Query: 562 RASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPLPXT 741
R S+ LK E+ P T P LP SP P LP T PP + PLP
Sbjct: 555 RDSKPIALKEEIVTPKETETSEKETPPPLPTIASP---PPPLPTTTPP---PQTPPLPPL 608
Query: 742 SPCTXLXPTPXLAP 783
P L P L P
Sbjct: 609 PPIPALPQQPPLPP 622
>AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein.
Length = 1721
Score = 34.3 bits (75), Expect = 0.64
Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = +1
Query: 553 PPERASQKSTLKSEVAKPXRT-IKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXP 729
P + + KST K P P P KLPPC P PD PP S P
Sbjct: 214 PAQEKAPKSTHKPVALTPTAPGAPSPAAGPTKLPPCCHP-------PDPKPPASSPTPPP 266
Query: 730 LPXTSPCTXLXPTPXLAP 783
P ++PCT L P +P
Sbjct: 267 RP-SAPCT-LNVCPASSP 282
>X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.85
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRA-GSEXGERQGGSLAGXTPG 624
G G G R G G G+ G G+ R GG SG R+ G G+R GG G G
Sbjct: 404 GRGGRGGDRGGYG-----GDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGG 458
>U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding protein
RBP56 protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.85
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRA-GSEXGERQGGSLAGXTPG 624
G G G R G G G+ G G+ R GG SG R+ G G+R GG G G
Sbjct: 407 GRGGRGGDRGGYG-----GDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGG 461
>BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.85
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRA-GSEXGERQGGSLAGXTPG 624
G G G R G G G+ G G+ R GG SG R+ G G+R GG G G
Sbjct: 407 GRGGRGGDRGGYG-----GDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGG 461
>AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.85
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRA-GSEXGERQGGSLAGXTPG 624
G G G R G G G+ G G+ R GG SG R+ G G+R GG G G
Sbjct: 404 GRGGRGGDRGGYG-----GDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGG 458
>AB183864-1|BAD86792.1| 1271|Homo sapiens diacylglycerol kinase
kappa protein.
Length = 1271
Score = 33.9 bits (74), Expect = 0.85
Identities = 20/49 (40%), Positives = 20/49 (40%)
Frame = +1
Query: 625 PGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPLPXTSPCTXLXPTP 771
P P PP P PA P PP L EA P P PC L P P
Sbjct: 20 PAESPEPPPPWPPPPPPPA--PPPAPPL-LSEASPEPIPEPCPELAPGP 65
>AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.85
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRA-GSEXGERQGGSLAGXTPG 624
G G G R G G G+ G G+ R GG SG R+ G G+R GG G G
Sbjct: 404 GRGGRGGDRGGYG-----GDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGG 458
>AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.85
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRA-GSEXGERQGGSLAGXTPG 624
G G G R G G G+ G G+ R GG SG R+ G G+R GG G G
Sbjct: 407 GRGGRGGDRGGYG-----GDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGG 461
>AB005297-1|BAA23647.1| 1584|Homo sapiens BAI 1 protein.
Length = 1584
Score = 33.1 bits (72), Expect = 1.5
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +1
Query: 547 LRPPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXS--DPARLPDTCPPFSLRE 720
LRP + K ++ + R I + A LP RSP S P+ P PP
Sbjct: 1355 LRPKPKEEPKYSIHIDQMPQTRLIHLSTAPEASLP-ARSPPSRQPPSGGPPEAPPAQPPP 1413
Query: 721 AXPLPXTSPCTXLXPTPXLAP 783
P P P L P P L P
Sbjct: 1414 PPPPPPPPPQQPLPPPPNLEP 1434
>BC033513-1|AAH33513.1| 265|Homo sapiens Unknown (protein for
IMAGE:5172161) protein.
Length = 265
Score = 32.7 bits (71), Expect = 2.0
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = -3
Query: 716 RREKGGQVSGKRAGSEXGERQGGSLAGXTPGIFIVRXGFATSDLSVDFCDARSGGRXPME 537
R E G +G +A + R+GG A PG G ++ D C R GR P
Sbjct: 151 REEPGPSAAGGQARASAARRRGGPTAAAPPGSPAPLRG-----MNADRCSQREAGRCPGA 205
Query: 536 KAPATRPFYG 507
+ RP++G
Sbjct: 206 ET-TKRPYWG 214
>X14487-1|CAA32649.1| 593|Homo sapiens protein ( Human gene for
acidic (type I) cytokeratin 10. ).
Length = 593
Score = 31.9 bits (69), Expect = 3.4
Identities = 22/61 (36%), Positives = 25/61 (40%)
Frame = -3
Query: 806 SPGXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAGXTP 627
S G G+G G+ G G G G +S GG SG GS G GGS G
Sbjct: 494 SSGGGYGGGSSGGGS----SGGGYGGGSSSGGHGGGSSSGGHGGSSSGGYGGGSSGGGGG 549
Query: 626 G 624
G
Sbjct: 550 G 550
Score = 31.1 bits (67), Expect = 6.0
Identities = 17/59 (28%), Positives = 21/59 (35%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAGXTPG 624
G G G + G G G G G+ GG G +G G GG G + G
Sbjct: 488 GGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGGSSSGGHGGSSSGGYGGGSSGG 546
>M99061-1|AAC83410.1| 645|Homo sapiens epidermal cytokeratin 2
protein.
Length = 645
Score = 31.9 bits (69), Expect = 3.4
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREK----GGQVSGKRAGSEXGERQGGS 645
G G G G R G G G + G G+ S K GG G +G G GGS
Sbjct: 570 GSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGGS 625
>BC101149-1|AAI01150.1| 128|Homo sapiens keratin associated protein
2-4 protein.
Length = 128
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 646 LPPCRSPXSDPARLPDTCPPFSLREAXPLPXT---SPCTXLXPTP 771
+P C P +P R P C P SL+E P T S CT + P
Sbjct: 47 VPRCTRPICEPCRRPVCCDPCSLQEGCCRPITCCPSSCTAVVCRP 91
>BC101148-1|AAI01149.1| 128|Homo sapiens keratin associated protein
2-4 protein.
Length = 128
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 646 LPPCRSPXSDPARLPDTCPPFSLREAXPLPXT---SPCTXLXPTP 771
+P C P +P R P C P SL+E P T S CT + P
Sbjct: 47 VPRCTRPICEPCRRPVCCDPCSLQEGCCRPITCCPSSCTAVVCRP 91
>BC101147-1|AAI01148.1| 128|Homo sapiens keratin associated protein
2-4 protein.
Length = 128
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 646 LPPCRSPXSDPARLPDTCPPFSLREAXPLPXT---SPCTXLXPTP 771
+P C P +P R P C P SL+E P T S CT + P
Sbjct: 47 VPRCTRPICEPCRRPVCCDPCSLQEGCCRPITCCPSSCTAVVCRP 91
>BC099644-1|AAH99644.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 31.9 bits (69), Expect = 3.4
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREK----GGQVSGKRAGSEXGERQGGS 645
G G G G R G G G + G G+ S K GG G +G G GGS
Sbjct: 564 GSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGGS 619
>BC099643-1|AAH99643.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 31.9 bits (69), Expect = 3.4
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREK----GGQVSGKRAGSEXGERQGGS 645
G G G G R G G G + G G+ S K GG G +G G GGS
Sbjct: 564 GSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGGS 619
>BC096294-1|AAH96294.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 31.9 bits (69), Expect = 3.4
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREK----GGQVSGKRAGSEXGERQGGS 645
G G G G R G G G + G G+ S K GG G +G G GGS
Sbjct: 564 GSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGGS 619
>BC063625-1|AAH63625.1| 128|Homo sapiens KRTAP2-4 protein protein.
Length = 128
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 646 LPPCRSPXSDPARLPDTCPPFSLREAXPLPXT---SPCTXLXPTP 771
+P C P +P R P C P SL+E P T S CT + P
Sbjct: 47 VPRCTRPICEPCRRPVCCDPCSLQEGCCRPITCCPSSCTAVVCRP 91
>AJ406930-1|CAC27569.1| 128|Homo sapiens keratin associated protein
2.4 protein.
Length = 128
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 646 LPPCRSPXSDPARLPDTCPPFSLREAXPLPXT---SPCTXLXPTP 771
+P C P +P R P C P SL+E P T S CT + P
Sbjct: 47 VPRCTRPICEPCRRPVCCDPCSLQEGCCRPITCCPSSCTAVVCRP 91
>AJ302536-1|CAC27564.1| 85|Homo sapiens keratin associated protein
KAP2.2 protein.
Length = 85
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 646 LPPCRSPXSDPARLPDTCPPFSLREAXPLPXT---SPCTXLXPTP 771
+P C P +P R P C P SL+E P T S CT + P
Sbjct: 4 VPRCTRPICEPCRRPVCCDPCSLQEGCCRPITCCPSSCTAVVCRP 48
>AJ296345-1|CAC24555.1| 96|Homo sapiens keratin associated protein
protein.
Length = 96
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 646 LPPCRSPXSDPARLPDTCPPFSLREAXPLPXT---SPCTXLXPTP 771
+P C P +P R P C P SL+E P T S CT + P
Sbjct: 15 VPRCTRPICEPCRRPVCCDPCSLQEGCCRPITCCPSSCTAVVCRP 59
>AF019084-1|AAB81946.1| 645|Homo sapiens keratin 2e protein.
Length = 645
Score = 31.9 bits (69), Expect = 3.4
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREK----GGQVSGKRAGSEXGERQGGS 645
G G G G R G G G + G G+ S K GG G +G G GGS
Sbjct: 570 GSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGGS 625
>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
Length = 3851
Score = 31.5 bits (68), Expect = 4.5
Identities = 23/88 (26%), Positives = 36/88 (40%)
Frame = +1
Query: 487 GQQKARNP*KGRVAGAFSIGLRPPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSP 666
G Q+A +P + A A + G P + E P RT+++ RSP
Sbjct: 12 GNQRAASP-TPKQASATTPGHESPRETRAQGPAGQEADGPRRTLQVDSRTQRS---GRSP 67
Query: 667 XSDPARLPDTCPPFSLREAXPLPXTSPC 750
P R P+S+ + PLP ++ C
Sbjct: 68 SVSPDRGSTPTSPYSVPQIAPLPSSTLC 95
>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc
finger protein protein.
Length = 3926
Score = 31.5 bits (68), Expect = 4.5
Identities = 23/88 (26%), Positives = 36/88 (40%)
Frame = +1
Query: 487 GQQKARNP*KGRVAGAFSIGLRPPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSP 666
G Q+A +P + A A + G P + E P RT+++ RSP
Sbjct: 87 GNQRAASP-TPKQASATTPGHESPRETRAQGPAGQEADGPRRTLQVDSRTQRS---GRSP 142
Query: 667 XSDPARLPDTCPPFSLREAXPLPXTSPC 750
P R P+S+ + PLP ++ C
Sbjct: 143 SVSPDRGSTPTSPYSVPQIAPLPSSTLC 170
>BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating
protein 17 protein.
Length = 881
Score = 31.1 bits (67), Expect = 6.0
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 5/106 (4%)
Frame = +1
Query: 481 AKGQQKARNP*KGRVAGAFSIGL-RPPERASQKSTLKSEVAKPXRTIKIPGVX--PAKLP 651
A K NP G G S G + P S K +S T + PG P++L
Sbjct: 637 APAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLS 696
Query: 652 PCR--SPXSDPARLPDTCPPFSLREAXPLPXTSPCTXLXPTPXLAP 783
R S P + P+ PP +A PL T P + P P P
Sbjct: 697 APRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALP 742
>AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein
protein.
Length = 414
Score = 31.1 bits (67), Expect = 6.0
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 5/106 (4%)
Frame = +1
Query: 481 AKGQQKARNP*KGRVAGAFSIGL-RPPERASQKSTLKSEVAKPXRTIKIPGVX--PAKLP 651
A K NP G G S G + P S K +S T + PG P++L
Sbjct: 170 APAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLS 229
Query: 652 PCR--SPXSDPARLPDTCPPFSLREAXPLPXTSPCTXLXPTPXLAP 783
R S P + P+ PP +A PL T P + P P P
Sbjct: 230 APRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALP 275
>AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens
cDNA FLJ43368 fis, clone NT2RP8000483, moderately
similar to Rattus norvegicus mRNA for Nadrin E2. ).
Length = 608
Score = 31.1 bits (67), Expect = 6.0
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 5/106 (4%)
Frame = +1
Query: 481 AKGQQKARNP*KGRVAGAFSIGL-RPPERASQKSTLKSEVAKPXRTIKIPGVX--PAKLP 651
A K NP G G S G + P S K +S T + PG P++L
Sbjct: 364 APAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLS 423
Query: 652 PCR--SPXSDPARLPDTCPPFSLREAXPLPXTSPCTXLXPTPXLAP 783
R S P + P+ PP +A PL T P + P P P
Sbjct: 424 APRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALP 469
>AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens
cDNA FLJ14661 fis, clone NT2RP2002710, weakly similar to
SH3-BINDING PROTEIN 3BP-1. ).
Length = 803
Score = 31.1 bits (67), Expect = 6.0
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 5/106 (4%)
Frame = +1
Query: 481 AKGQQKARNP*KGRVAGAFSIGL-RPPERASQKSTLKSEVAKPXRTIKIPGVX--PAKLP 651
A K NP G G S G + P S K +S T + PG P++L
Sbjct: 559 APAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLS 618
Query: 652 PCR--SPXSDPARLPDTCPPFSLREAXPLPXTSPCTXLXPTPXLAP 783
R S P + P+ PP +A PL T P + P P P
Sbjct: 619 APRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALP 664
>AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens
cDNA FLJ13219 fis, clone NT2RP4001849, weakly similar to
SH3-BINDING PROTEIN 3BP-1. ).
Length = 726
Score = 31.1 bits (67), Expect = 6.0
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 5/106 (4%)
Frame = +1
Query: 481 AKGQQKARNP*KGRVAGAFSIGL-RPPERASQKSTLKSEVAKPXRTIKIPGVX--PAKLP 651
A K NP G G S G + P S K +S T + PG P++L
Sbjct: 482 APAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLS 541
Query: 652 PCR--SPXSDPARLPDTCPPFSLREAXPLPXTSPCTXLXPTPXLAP 783
R S P + P+ PP +A PL T P + P P P
Sbjct: 542 APRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALP 587
>AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein.
Length = 803
Score = 31.1 bits (67), Expect = 6.0
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 5/106 (4%)
Frame = +1
Query: 481 AKGQQKARNP*KGRVAGAFSIGL-RPPERASQKSTLKSEVAKPXRTIKIPGVX--PAKLP 651
A K NP G G S G + P S K +S T + PG P++L
Sbjct: 559 APAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLS 618
Query: 652 PCR--SPXSDPARLPDTCPPFSLREAXPLPXTSPCTXLXPTPXLAP 783
R S P + P+ PP +A PL T P + P P P
Sbjct: 619 APRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALP 664
>AK097179-1|BAC04972.1| 549|Homo sapiens protein ( Homo sapiens
cDNA FLJ39860 fis, clone SPLEN2015121. ).
Length = 549
Score = 30.7 bits (66), Expect = 7.9
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 652 PCRSPXSDPARL-PDTCPPFSLREAXPLPXTSPCTXLXPT 768
P R DPAR PDT PP R P P C+ PT
Sbjct: 4 PPRGRGIDPARTNPDTFPPSGARCMEPSPERPACSQQEPT 43
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,476,093
Number of Sequences: 237096
Number of extensions: 1989614
Number of successful extensions: 11828
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 10870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11710
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12214492840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -