Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A16
(934 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 33 0.39
U28409-4|AAC46590.2| 394|Caenorhabditis elegans Saposin-like pr... 32 0.67
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.2
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 31 1.2
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 31 1.2
Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical p... 30 2.1
Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical p... 30 2.1
Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical p... 30 2.1
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 29 4.8
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 4.8
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 6.3
AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophi... 28 8.3
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/78 (26%), Positives = 30/78 (38%)
Frame = +1
Query: 538 SIGLRPPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLR 717
S GL PP T++ + P +T +P P L P + P R P CPP +
Sbjct: 72 STGL-PPMTMMLPPTVQEPLPTPVKTPPLPR-PPGNLNPVQQPQIPVQRTPPQCPPPPVP 129
Query: 718 EAXPLPXTSPCTXLXPTP 771
+ +P P P
Sbjct: 130 HPPQITQMAPILPTSPAP 147
>U28409-4|AAC46590.2| 394|Caenorhabditis elegans Saposin-like
protein family protein11 protein.
Length = 394
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +1
Query: 613 TIKIPGVXPAKLPPCRSPXSDPARLPDTCPP 705
TIKIP + P KLP P + P LP T P
Sbjct: 214 TIKIPEIVPTKLPTVEVPDTIPKTLPTTKIP 244
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 613 TIKIPGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXP---LPXTSPCT 753
T+KIP + P LP + P P +LP P ++ + P +P P T
Sbjct: 201 TVKIPDIIPITLPTIKIPEIVPTKLPTVEVPDTIPKTLPTTKIPDIVPIT 250
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3
Query: 480 SKRPAKGQEPVKRPRCWRFFHRXPPP*TSITKIDAQVRGGETXPDYKDTRRXPXQAPS 653
S + A ++PV +PR FH P TS I RG + P +R P AP+
Sbjct: 323 SAKAATKEKPVPKPRSEMVFHDVPS--TSKDDIATGTRGNKEFPAIATPQRVPKPAPT 378
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3
Query: 480 SKRPAKGQEPVKRPRCWRFFHRXPPP*TSITKIDAQVRGGETXPDYKDTRRXPXQAPS 653
S + A ++PV +PR FH P TS I RG + P +R P AP+
Sbjct: 323 SAKAATKEKPVPKPRSEMVFHDVPS--TSKDDIATGTRGNKEFPAIATPQRVPKPAPT 378
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/78 (30%), Positives = 28/78 (35%), Gaps = 3/78 (3%)
Frame = +1
Query: 553 PPERASQKSTLKSEVAKPXRTIKIPGVXPAKLPPCRSP---XSDPARLPDTCPPFSLREA 723
PP +KS P ++P P + PP R P P R P PP S
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP-SPEPR 181
Query: 724 XPLPXTSPCTXLXPTPXL 777
P P T P P P L
Sbjct: 182 NP-PRTPPSPIPPPPPRL 198
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Frame = +1
Query: 598 AKPXRTIKIPGVXPAKL--PPCRSPXSDPARLPDTCPPFSLREAXPLPXTSPCTXLXPTP 771
A P P + P + PP P P P CPP P+P SPC P P
Sbjct: 39 APPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPP----PPPPMPSYSPCQSYAPAP 94
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3
Query: 480 SKRPAKGQEPVKRPRCWRFFHRXPPP*TSITKIDAQVRGGETXPDYKDTRRXPXQAPS 653
S + A ++PV +PR FH P TS I RG + P +R P AP+
Sbjct: 323 SAKAATKEKPVPKPRSEMVFHDVPS--TSKDDIATGTRGNKEFPAIATPQRVPKPAPT 378
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3
Query: 480 SKRPAKGQEPVKRPRCWRFFHRXPPP*TSITKIDAQVRGGETXPDYKDTRRXPXQAPS 653
S + A ++PV +PR FH P TS I RG + P +R P AP+
Sbjct: 323 SAKAATKEKPVPKPRSEMVFHDVPS--TSKDDIATGTRGNKEFPAIATPQRVPKPAPT 378
>Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical
protein C36B1.12c protein.
Length = 662
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -2
Query: 519 AFLRVPGLLLAFCSHVLSCV-IPLILWITVL 430
AF+ + + +A C HVL C+ +P + WI++L
Sbjct: 395 AFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical
protein C36B1.12b protein.
Length = 640
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -2
Query: 519 AFLRVPGLLLAFCSHVLSCV-IPLILWITVL 430
AF+ + + +A C HVL C+ +P + WI++L
Sbjct: 395 AFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical
protein C36B1.12a protein.
Length = 652
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -2
Query: 519 AFLRVPGLLLAFCSHVLSCV-IPLILWITVL 430
AF+ + + +A C HVL C+ +P + WI++L
Sbjct: 395 AFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +1
Query: 625 PGVXPAKLPPCRSPXSDPARLPDTCPPFSLREAXPLPXTSPCTXLXPTPXLAP 783
P P PP PA+LP T PP + P P SP P+P +P
Sbjct: 494 PSSAPVHTPPAPPAIPSPAKLP-TAPPPVEKPVTPSPSASP----LPSPVSSP 541
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/61 (29%), Positives = 24/61 (39%)
Frame = -3
Query: 806 SPGXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAGXTP 627
+P G G+R G G R G +R GG+ G+ G G +GG G
Sbjct: 141 APRGGGRGGSRRGGGGRGGGRTNSGGEETARDTDGGERGGRGGGRRGGRGRGGRGRGGRG 200
Query: 626 G 624
G
Sbjct: 201 G 201
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -3
Query: 800 GXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAG 636
G G G G G G G G G + + GG ++ G G+RQGG G
Sbjct: 72 GFGGGGGGNYGGGGGNQGG--GGGGGFNFNDIGGLINSMGGGGGGGQRQGGGGGG 124
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = -3
Query: 806 SPGXGWGXGARXGVGXRXVQGEVXGXGHASRREKGGQVSGKRAGSEXGERQGGSLAG 636
SPG G G R G G GH + G G+ G +GG G
Sbjct: 231 SPGGRRGHGGRHGSRSGSPGGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRHGG 287
>AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophila
vasa intronic gene)ortholog protein 1, isoform a
protein.
Length = 378
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 722 ASRREKGGQVSGKRAGSEXGERQGG 648
+ R ++GG G R G G+RQGG
Sbjct: 332 SERPQRGGPRGGGRGGGRGGQRQGG 356
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,570,394
Number of Sequences: 27780
Number of extensions: 278488
Number of successful extensions: 917
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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