Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_A15
         (995 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    27   0.23 
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    25   0.91 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.4  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = +2

Query: 647 PPPXNPPKXXXXXPPXPXPXXPPPPXPPXXP 739
           P P  PP         P P  PP P PP  P
Sbjct: 160 PGPALPPTGFLCNNYPPLPQVPPLPLPPIFP 190



 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +3

Query: 690 PXXPPXPPPPXXPPXXPXP 746
           P  PP P PP  PP    P
Sbjct: 178 PQVPPLPLPPIFPPTMINP 196


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = +2

Query: 647 PPPXNPPKXXXXXPPXPXPXXPPPPXPP 730
           P P  PP         P P  PP P PP
Sbjct: 160 PGPALPPAGFLCNNYLPLPQVPPLPLPP 187


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -1

Query: 527 HSVTLRKAMTVV---CQILLI*FEEPHNIM*HSKYRNALCCLDKI*GHLN 387
           +S  L K  T++   C +LL+      NI+   K  NA+  L KI   LN
Sbjct: 62  YSTPLAKITTILQRYCSVLLVFLTYFFNILFRKKLLNAVKILSKIDETLN 111


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -1

Query: 527 HSVTLRKAMTVV---CQILLI*FEEPHNIM*HSKYRNALCCLDKI*GHLN 387
           +S  L K  T++   C +LL+      NI+   K  NA+  L KI   LN
Sbjct: 58  YSTPLAKITTILQRYCSVLLVFLTYFFNILFRKKLLNAVKILSKIDETLN 107


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +2

Query: 653  PXNPPKXXXXXPPXPXPXXPP 715
            P NP +     PP P    PP
Sbjct: 995  PDNPSREDCTKPPEPVTPAPP 1015


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,584
Number of Sequences: 336
Number of extensions: 4225
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28340642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)