Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A13
(884 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23885| Best HMM Match : Peptidase_S10 (HMM E-Value=0) 31 1.6
SB_35441| Best HMM Match : ResIII (HMM E-Value=0.078) 29 3.8
SB_23746| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_59334| Best HMM Match : zf-AN1 (HMM E-Value=0.72) 29 3.8
SB_46958| Best HMM Match : DUF1349 (HMM E-Value=5.2) 29 5.0
SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17) 29 5.0
SB_3753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_2876| Best HMM Match : Peptidase_C2 (HMM E-Value=2.8) 29 5.0
SB_28108| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_22826| Best HMM Match : F5_F8_type_C (HMM E-Value=7.9e-09) 29 6.6
SB_44861| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 29 6.6
SB_33001| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_5118| Best HMM Match : zf-C4_Topoisom (HMM E-Value=3.5) 29 6.6
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25) 28 8.7
SB_37849| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_28796| Best HMM Match : LIM (HMM E-Value=5.2) 28 8.7
SB_25787| Best HMM Match : Asparaginase_2 (HMM E-Value=0.097) 28 8.7
SB_5182| Best HMM Match : TSP_1 (HMM E-Value=1.1e-11) 28 8.7
SB_59747| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_56547| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-05) 28 8.7
SB_47739| Best HMM Match : WCCH (HMM E-Value=3.5) 28 8.7
SB_40200| Best HMM Match : Ribosomal_L27 (HMM E-Value=2.6) 28 8.7
SB_5577| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_23885| Best HMM Match : Peptidase_S10 (HMM E-Value=0)
Length = 446
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 606 LFPSFIHTQKRNPXTHLKDPDMFWDLLTLRPETIHHLLYLFGXRG 740
+F F + ++ PD WD +T+RP + H +L+G RG
Sbjct: 12 VFTIFFFKESQSAVPRTSIPDEKWDYVTVRP-SAHMFWWLYGARG 55
>SB_35441| Best HMM Match : ResIII (HMM E-Value=0.078)
Length = 767
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKG---AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRF 467
F CHP T R+ + + +G F + D+ +A +V S+GK+ I
Sbjct: 143 FSEACHPYTSGRVGQHLEQNEGWITTPEFKDLLESGDLVMATAREVLYSVGKKDSIKFPH 202
Query: 468 STVGGESGSADTVRDPRGFAVKF 536
S G + R AV+F
Sbjct: 203 SIACRPGGEDSQYPEGRDLAVRF 225
>SB_23746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKG-AGAFGYFEV--THDITKYSAAKVFESIGKRTPIAVRF 467
F CHP T R+ + + +G G ++ + D+ +A +V S+GK+ I
Sbjct: 138 FSEACHPYTSGRVGQHLEQNEGWITTPGLKDLLDSGDLVMATAREVLYSVGKKDSIKFLH 197
Query: 468 STVGGESGSADTVRDPRGFAVKF 536
S G D R AV+F
Sbjct: 198 SIACRPGGEDSQYPDGRDLAVRF 220
>SB_59334| Best HMM Match : zf-AN1 (HMM E-Value=0.72)
Length = 1161
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKGAGAFGYFEV---THDITKYSAAKVFESIGKRTPIAVRF 467
F CHP T R+ + + +G + + D+ +A KV S+GK+ I
Sbjct: 545 FSEACHPYTSGRVGQHLERNEGCITTPELKDLLDSGDLVMATARKVLYSVGKKDSIKFPH 604
Query: 468 STVGGESGSADTVRDPRGFAVKF 536
S G + R AV+F
Sbjct: 605 SVACRPGGEDSQYPEGRDLAVRF 627
>SB_46958| Best HMM Match : DUF1349 (HMM E-Value=5.2)
Length = 248
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 629 SEEKPXHTSERSRHVLG-PFDLKTRDHPSPSLLVWXPWVFLMATTYEWIWFPYXXXVXXX 805
++ K HT RS H P+ + P PSLLVW W A W++ Y
Sbjct: 79 AQSKMRHTFLRSIHQRDCPYK---QGGPYPSLLVWTVWTLAQAF---WVYSEYTINTFPD 132
Query: 806 CXVL 817
C ++
Sbjct: 133 CDIV 136
>SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17)
Length = 1828
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 629 SEEKPXHTSERSRHVLG-PFDLKTRDHPSPSLLVWXPWVFLMATTYEWIWFPYXXXVXXX 805
++ K HT RS H P+ + P PSLLVW W A W++ Y
Sbjct: 434 AQSKMRHTFLRSIHQRDCPYK---QGGPYPSLLVWTVWTLAQAF---WVYSEYTINTFPD 487
Query: 806 CXVL 817
C ++
Sbjct: 488 CDIV 491
>SB_3753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKG----AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVR 464
F CHP T R+ + + +G G + + D+ +A V S+GK+ I
Sbjct: 384 FSEACHPYTSGRVGKHLEQNEGWVTTPELKGLLD-SGDLVMATARDVLYSVGKKDSIKFP 442
Query: 465 FSTVGGESGSADTVRDPRGFAVKFYTD 545
S G + R AV+F+ D
Sbjct: 443 HSIACRPGGEDSQYPEGRDLAVRFHAD 469
>SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 666 LDLSDVXQGFSSEYG*NSGIMLDLL*RKWEYYFQLNPTLH 547
LD+ GF + G+ LD L K+ Y+F N TLH
Sbjct: 215 LDILKFYTGFEINDVSDCGVQLDKLIVKYHYFFYRNKTLH 254
>SB_2876| Best HMM Match : Peptidase_C2 (HMM E-Value=2.8)
Length = 947
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKG---AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRF 467
F CHP T R+ + + KG + D+ +A +V S+GK+ I
Sbjct: 452 FSKACHPYTSGRVGQHLEQNKGWITTPELKDLLDSGDLVMAAAREVLYSVGKKDSIKFPR 511
Query: 468 STVGGE 485
S+ GGE
Sbjct: 512 SSPGGE 517
>SB_28108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1558
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = -2
Query: 700 SGLKVKRSQNMSGSFRCVXGFLF*VWIKLGNNVGSLIKKMGVLFPTKSHTPSSV*NFTAK 521
+G++ R Q RCV + VWIK G + +L K+M K + N
Sbjct: 1459 NGIQSPRMQTKMAEDRCVCTEVSNVWIKRGKSADALPKRM----CEKCNKEKQEGNGITA 1514
Query: 520 PRGSRTVSADPLSPPT 473
+ R S PLS P+
Sbjct: 1515 VKTRRNSSDSPLSSPS 1530
>SB_22826| Best HMM Match : F5_F8_type_C (HMM E-Value=7.9e-09)
Length = 1296
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKG---AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRF 467
F CHP T R+ +++ +G + D+ +A +V S+GK+ I
Sbjct: 913 FCEACHPYTSGRVGQQLEQNEGWITTPELKDLLDSGDLAMAAAREVLYSVGKKDSIKFPH 972
Query: 468 STVGGE 485
S+ GGE
Sbjct: 973 SSPGGE 978
>SB_44861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 810
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKG---AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRF 467
F CHP T R+ + + +G + D+ +A +V S+GK+ I
Sbjct: 213 FSEACHPYTSGRVGQHLEQNEGWITTPELKDLLGSGDLVMTTAREVLYSVGKKDSIKFPH 272
Query: 468 STVGGESGSADTVRDPRGFAVKFYTD 545
S G R AV+F+ D
Sbjct: 273 SIACRPGGEDSQYPKGRDLAVRFHAD 298
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKG---AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRF 467
F CHP T R+ + + +G + D+ A +V S+GK+ I
Sbjct: 716 FSEACHPYTSGRVGQHLEQNEGWITTPELKDLLDSGDLVMAMAREVLYSVGKKNSIKFPH 775
Query: 468 STVGGESGSADTVRDPRGFAVKF 536
S G + RG AV+F
Sbjct: 776 SIACCPGGEDSPYPEGRGLAVRF 798
>SB_33001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKG---AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRF 467
F CHP T R+ + + KG + D+ +A +V S+GK+ I
Sbjct: 135 FSEACHPYTSGRVEQHLEQNKGWITTPELKDLLDSGDLVTATAREVLYSVGKKDSIKFPH 194
Query: 468 STVGGESGSADTVRDPRGFAVKF 536
S G + R AV+F
Sbjct: 195 SIACRPGGEDSQYPEGRDLAVRF 217
>SB_5118| Best HMM Match : zf-C4_Topoisom (HMM E-Value=3.5)
Length = 425
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKG---AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRF 467
F CHP T R+ + + +G + D+ A +V S+GK+ I
Sbjct: 60 FSEACHPYTSGRVGQHLEQNEGWITTPELKDLLDSGDLVMAMAREVLYSVGKKNSIKFPH 119
Query: 468 STVGGESGSADTVRDPRGFAVKF 536
S G + RG AV+F
Sbjct: 120 SIACCPGGEDSPYPEGRGLAVRF 142
>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2190
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2
Query: 556 HTPSSV*NFTAKPRGSRTVSADPLSPPTVENLTAIGVLLP 437
+TPS TA PR SR + S PT + LTA +LP
Sbjct: 2119 YTPSCPDTLTATPRVSRHANRYAPSVPTHDTLTATPRVLP 2158
>SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25)
Length = 1088
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 450 PIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGVWDL 563
P+AV+ T+ + G ++ G V Y D+G W+L
Sbjct: 127 PLAVKLGTITPDGGGNSYLQCDTGLWVVAYGDEGQWNL 164
>SB_37849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1213
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKG---AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRF 467
F CHP T R+ + + KG + D+ +A +V S+GK+ I
Sbjct: 523 FSEACHPYTSGRVGQHLEQNKGWITTPELKDLLDSGDLAMAAAREVLYSVGKKDSIKFPH 582
Query: 468 STVGGE 485
S GGE
Sbjct: 583 SGSGGE 588
>SB_28796| Best HMM Match : LIM (HMM E-Value=5.2)
Length = 625
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/80 (25%), Positives = 31/80 (38%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTV 476
F CHP T R+ + + +G D+ +A +V S+GK+ I S
Sbjct: 46 FSEACHPYTSGRVGQHLEQNEGWPEPKDLLDLCDLVVATAREVLYSVGKKDSIKFPHSIA 105
Query: 477 GGESGSADTVRDPRGFAVKF 536
G + R AV+F
Sbjct: 106 CRPGGEDSQYPEGRDLAVRF 125
>SB_25787| Best HMM Match : Asparaginase_2 (HMM E-Value=0.097)
Length = 1623
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 666 LDLSDVXQGFSSEYG*NSGIMLDLL*RKWEYYFQLNPTLH 547
LD+ GF + G+ LD + K+ Y+F N TLH
Sbjct: 1355 LDILKFYTGFEINDVSDCGVQLDKMIVKYHYFFYRNKTLH 1394
>SB_5182| Best HMM Match : TSP_1 (HMM E-Value=1.1e-11)
Length = 1417
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 122 GTYKMASRDPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNG-PALLQDVNF 298
G Y +A++DPAT L Y + + + A K TV G P+L++D +
Sbjct: 1076 GVYMIATKDPAT-YLPVYCDVTSEPGAYTLLVTSANGNWKPQEVTVRNQGSPSLIRDYSI 1134
Query: 299 LDEMSSFDRXAYSRT 343
LD ++++T
Sbjct: 1135 LDYADDIKSASHAKT 1149
>SB_59747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1064
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKG---AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRF 467
F CHP T R+ + + +G + D+ +A KV S+GK+ I
Sbjct: 555 FSEACHPYTSGRVGQHLEQNEGWITTPELKDLLDSGDLAMAAARKVLYSVGKKDSIKFPH 614
Query: 468 STVGGE 485
S GGE
Sbjct: 615 SGPGGE 620
>SB_56547| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-05)
Length = 261
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 201 PGESFKVFL*LMSWSVAGSLEAILXVP 121
P +SF L +M+W V GSL IL +P
Sbjct: 129 PSQSFSNKLVIMAWVVGGSLGIILTLP 155
>SB_47739| Best HMM Match : WCCH (HMM E-Value=3.5)
Length = 932
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/80 (25%), Positives = 31/80 (38%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTV 476
F CHP T R+ + + +G D+ +A +V S+GK+ I S
Sbjct: 342 FSEACHPYTSGRVGQHLEQNEGWPEPKDLLDLCDLVVATAREVLYSVGKKDSIKFPHSIA 401
Query: 477 GGESGSADTVRDPRGFAVKF 536
G + R AV+F
Sbjct: 402 CRPGGEDSQYPEGRDLAVRF 421
>SB_40200| Best HMM Match : Ribosomal_L27 (HMM E-Value=2.6)
Length = 333
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKG---AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRF 467
F CHP T R+ + + +G + D+ +A +V S+GK+ I
Sbjct: 125 FSEACHPYTSGRVGQHLEQNEGWITTPELKDLLDSGDLAMAAAREVLYSVGKKVSIKFPH 184
Query: 468 STVGGE 485
S+ GGE
Sbjct: 185 SSPGGE 190
>SB_5577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Frame = +3
Query: 297 FLMKCHPLTGXRIPERVVHAKG---AGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRF 467
F CHP T R+ + + +G + D+ +A +V S+GK+ I +
Sbjct: 578 FSEACHPYTSGRVGQHLEQNEGWITTPELKDLLDSGDLVMATAREVLYSVGKKDSIKFPY 637
Query: 468 STVGGESGSADTVRDPRGFAVKF 536
S G + R AV+F
Sbjct: 638 SIACRPGGEDSQYPEGRDLAVRF 660
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,458,277
Number of Sequences: 59808
Number of extensions: 540002
Number of successful extensions: 1194
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2526446612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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