Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_A12
         (1062 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   6.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   8.1  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 447 WRSHWPSLDDHRNWY 403
           W +H P+ D   NWY
Sbjct: 661 WLNHSPNYDQVTNWY 675


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
 Frame = +2

Query: 92  IPRCCYPAALLXMRERSSFYASWLR------REVSDHQ 187
           +P CC   +      R S Y+S LR      R+  DHQ
Sbjct: 363 LPNCCGKWSSQKSEPRRSIYSSLLRYPRSIFRQTDDHQ 400


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = -2

Query: 179 RILLCVTRRHRNLSVHAXQGVQRDNNTLEYILNCDRFRCSGQEC 48
           RI   +  RHRNL     + V+   N L  I      R    EC
Sbjct: 220 RISCVIASRHRNLEATESENVRPRRNVL--IERAKSIRARRTEC 261


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,233
Number of Sequences: 438
Number of extensions: 5164
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 35427294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)