Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_A11
         (1018 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4R0U8 Cluster: Predicted protein; n=1; Magnaporthe gri...    36   1.3  
UniRef50_A6UHC7 Cluster: Outer membrane autotransporter barrel d...    33   8.9  

>UniRef50_A4R0U8 Cluster: Predicted protein; n=1; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 198

 Score = 36.3 bits (80), Expect = 1.3
 Identities = 19/68 (27%), Positives = 22/68 (32%)
 Frame = +3

Query: 672 PXKXXPPPPLIXXXPPPXXDXXXXXLQPRXXXGPXXXXPPXSPXGPAXGXFXXLLXTXFX 851
           P    PPPP I   PPP          P     P    PP  P  P       ++     
Sbjct: 48  PEPCPPPPPEICEPPPPPPPPVVEVPPPCIEVPPPPPPPPPPPPCPPEPELIDVISVDVD 107

Query: 852 NPXPXPPR 875
            P P PP+
Sbjct: 108 PPEPKPPK 115


>UniRef50_A6UHC7 Cluster: Outer membrane autotransporter barrel
           domain; n=1; Sinorhizobium medicae WSM419|Rep: Outer
           membrane autotransporter barrel domain - Sinorhizobium
           medicae WSM419
          Length = 864

 Score = 33.5 bits (73), Expect = 8.9
 Identities = 18/58 (31%), Positives = 19/58 (32%)
 Frame = +3

Query: 639 RGGGNXXXGXXPXKXXPPPPLIXXXPPPXXDXXXXXLQPRXXXGPXXXXPPXSPXGPA 812
           R GG       P    PPPP     PPP          P     P    PP  P GP+
Sbjct: 480 RSGGVSPPPPPPPPPPPPPPPPPPSPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPGPS 537


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,521,437
Number of Sequences: 1657284
Number of extensions: 5934372
Number of successful extensions: 13591
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11255
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 96755564499
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)