Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_A11
         (1018 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.1  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    31   1.5  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    30   3.4  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    30   3.4  
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350...    29   7.9  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 16/47 (34%), Positives = 16/47 (34%)
 Frame = +3

Query: 672 PXKXXPPPPLIXXXPPPXXDXXXXXLQPRXXXGPXXXXPPXSPXGPA 812
           P K  PPPP     PPP          P    G     PP  P G A
Sbjct: 340 PPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGA 386


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 18/65 (27%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
 Frame = +3

Query: 618 PSXPXXXRGGGNXXXGXXPXKXXPPPP-LIXXXPPPXXDXXXXXLQPRXXXGPXXXXPPX 794
           P  P   +   N   G    +  PPPP +    PPP         QP     P    PP 
Sbjct: 60  PGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPS 119

Query: 795 SPXGP 809
           +P  P
Sbjct: 120 APPPP 124


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 13/42 (30%), Positives = 15/42 (35%)
 Frame = +3

Query: 687  PPPPLIXXXPPPXXDXXXXXLQPRXXXGPXXXXPPXSPXGPA 812
            PPPP +   PPP          P     P    PP  P  P+
Sbjct: 1137 PPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPS 1178


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 16/61 (26%), Positives = 18/61 (29%)
 Frame = +3

Query: 618 PSXPXXXRGGGNXXXGXXPXKXXPPPPLIXXXPPPXXDXXXXXLQPRXXXGPXXXXPPXS 797
           P+ P     G        P +  PPPP     PPP          P    G     PP  
Sbjct: 251 PAAPGTLPNGSGGPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPP 310

Query: 798 P 800
           P
Sbjct: 311 P 311


>01_07_0021 -
           40533864-40534583,40534779-40534814,40534909-40535048,
           40535837-40535922,40536430-40536653,40536770-40536865,
           40538766-40538833,40539945-40540055,40540799-40540955
          Length = 545

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 4/66 (6%)
 Frame = +3

Query: 687 PPPPL---IXXXPPPXXDXXXXXLQPRXXXGPXXXXPPXSPXGPAXGXFXXLLXTXFXN- 854
           PPPPL       PPP  +             P    PP  P  P  G F  +    F   
Sbjct: 418 PPPPLPSDAFEQPPPPPEHPPPPESTSPPPPPTSDPPPVPPPPPTTGSFMPIPSAPFAGL 477

Query: 855 PXPXPP 872
           P P  P
Sbjct: 478 PVPAGP 483


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,628,562
Number of Sequences: 37544
Number of extensions: 252071
Number of successful extensions: 878
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2998973440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)