Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A06
(983 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 41 3e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.14
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 30 0.44
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.44
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 29 0.76
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 1.0
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 1.8
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 1.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 2.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.3
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 27 5.4
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 7.1
SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch... 26 7.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 9.4
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 26 9.4
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 9.4
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 40.7 bits (91), Expect = 3e-04
Identities = 37/140 (26%), Positives = 41/140 (29%), Gaps = 7/140 (5%)
Frame = +3
Query: 576 PPPX*XAAXXTXXXGXNXGXPXPXXEPPLPXXNPXPTPXASXFXPRXPGXXGXAFXXFXX 755
PPP AA P P P P P +S P A
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSA 400
Query: 756 P*XTPPPPGEXA---VXFXXXPPXXXP--PPTXPP--PPXXXRXGTGFXXXPGGXXXXPP 914
P PP G + PP P PP+ PP PP P PP
Sbjct: 401 P--ALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Query: 915 XPRGXXXSPXFXPRAPXXPP 974
P G +P P AP PP
Sbjct: 459 LPAGMPAAPPLPPAAPAPPP 478
Score = 30.3 bits (65), Expect = 0.44
Identities = 33/120 (27%), Positives = 35/120 (29%), Gaps = 6/120 (5%)
Frame = +3
Query: 636 PXPXXEPPLPXXNPXPTPXASXFXPRXPGXXGXAFXXFXXP*XTPPPPGEXAVXFXXXPP 815
P P PP P +P S P P A P PPP +
Sbjct: 251 PAPPPIPP-PSNGTVSSPPNSPPRPIAPVSMNPAINSTSKP-PLPPPSSRVSAAALAANK 308
Query: 816 XXXPPPTXPPPPXXXR--XGTGFXXXPGGXXXXPPXPR----GXXXSPXFXPRAPXXPPP 977
PPP PPP R G PP PR G P AP PPP
Sbjct: 309 KRPPPP--PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 30.3 bits (65), Expect = 0.44
Identities = 21/72 (29%), Positives = 24/72 (33%)
Frame = +3
Query: 675 PXPTPXASXFXPRXPGXXGXAFXXFXXP*XTPPPPGEXAVXFXXXPPXXXPPPTXPPPPX 854
P P P + + P G + P PPPP A PP P PPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPP---PPPPRSNAAGSIPLPPQGRSAP--PPPPP 366
Query: 855 XXRXGTGFXXXP 890
TG P
Sbjct: 367 RSAPSTGRQPPP 378
Score = 27.9 bits (59), Expect = 2.3
Identities = 24/77 (31%), Positives = 26/77 (33%), Gaps = 7/77 (9%)
Frame = +3
Query: 768 PPPPGEXAVXFXXXPPXXX-------PPPTXPPPPXXXRXGTGFXXXPGGXXXXPPXPRG 926
PPPP + PP PPP PPPP G+ P G PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPP--PPPPRSNAAGS-IPLPPQGRSAPPPPP-- 365
Query: 927 XXXSPXFXPRAPXXPPP 977
P P PPP
Sbjct: 366 ----PRSAPSTGRQPPP 378
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 765 TPPPPGEXAVXFXXXPPXXXPPPTXPPPP 851
TPPPP PP PP+ PPPP
Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 813 PXXXPPPTXPPPPXXXRXGTGFXXXPGGXXXXPPXPRGXXXSP 941
P PT PPPP P G PP P +P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 30.3 bits (65), Expect = 0.44
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 343 NFLRYSLLPTASTRERGRLEVRSALGTVHVICTVVDRFV 227
NF ++P STR+R + +R G +H+IC D +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.44
Identities = 38/164 (23%), Positives = 45/164 (27%), Gaps = 7/164 (4%)
Frame = +3
Query: 507 AGXSPLWRVXGIPXXKKXFAXLXPPPX*XAAXXTXXXGXNXGXPXPXXE---PPLPXXN- 674
+G P+ GIP K P P A + P P PP+P +
Sbjct: 1080 SGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP-APSGAPPVPKPSVAAPPVPVPSG 1138
Query: 675 PXPTPXASXFXPRXPGXXGXA---FXXFXXP*XTPPPPGEXAVXFXXXPPXXXPPPTXPP 845
P P S P P G P P G V PPP+ P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Query: 846 PPXXXRXGTGFXXXPGGXXXXPPXPRGXXXSPXFXPRAPXXPPP 977
P G P P G P +AP P P
Sbjct: 1199 PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 29.5 bits (63), Expect = 0.76
Identities = 30/116 (25%), Positives = 35/116 (30%), Gaps = 2/116 (1%)
Frame = +3
Query: 636 PXPXXEPPLPXXN--PXPTPXASXFXPRXPGXXGXAFXXFXXP*XTPPPPGEXAVXFXXX 809
P P PP+P + P P S P P P PP P + +V
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVP-KPAAGVPPVPPPSEAPPVP-KPSVGVPPV 1210
Query: 810 PPXXXPPPTXPPPPXXXRXGTGFXXXPGGXXXXPPXPRGXXXSPXFXPRAPXXPPP 977
PP P T PP P G P PP P +P P P
Sbjct: 1211 PP----PSTAPPVPTP---SAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 29.5 bits (63), Expect = 0.76
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 138 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 302
PT++ T T ++ T T + +TTT+ + T + T T P + T+ LP++
Sbjct: 102 PTVETTTTPMVETT-TITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 156 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSL 305
A+ L +++ T+ + P +T ET ++ S+ T T+ + TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 203 DYNPNG-NGYEPIDNGAYYVDRPQG---RPYFKPTPFPG 307
DYN N N Y PI N Y+++ G PYF PG
Sbjct: 119 DYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 4/73 (5%)
Frame = +3
Query: 768 PPPPGEXAVXFXXXPPXXXPPPT----XPPPPXXXRXGTGFXXXPGGXXXXPPXPRGXXX 935
PPPP V P PPP PPPP G P PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP----PPPPPPAVSAG 788
Query: 936 SPXFXPRAPXXPP 974
+ AP P
Sbjct: 789 GSRYYAPAPQAEP 801
Score = 27.5 bits (58), Expect = 3.1
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = +3
Query: 654 PPLPXXNPXPTPXASXFXPRXPGXXGXAFXXFXXP*XTPPPPGEXAVXFXXXPPXXXPPP 833
PP P P P P P G P PPPPG PPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGG--------PPPPPPPPGVAGAG---------PPP 777
Query: 834 TXPPPPXXXRXGTGF 878
PPPP G+ +
Sbjct: 778 PPPPPPAVSAGGSRY 792
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 24.2 bits (50), Expect(2) = 2.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 825 PPPTXPPPPXXXRXGTGF 878
PPP PPPP G F
Sbjct: 945 PPPPPPPPPLVSAAGGKF 962
Score = 21.8 bits (44), Expect(2) = 2.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 813 PXXXPPPTXPPP 848
P PPP PPP
Sbjct: 942 PAFPPPPPPPPP 953
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +3
Query: 765 TPPP---PGEXAVXFXXXPPXXXPPPTXPPPP 851
+PPP P A P PPP PPPP
Sbjct: 166 SPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 229 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 336
R + ++C R P RP + PW + + K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 7.1
Identities = 19/72 (26%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = +3
Query: 636 PXPXXEPPLPXXNPXPTPXASXFXPRXPGXXGXAFXXFXXP*XTPPPP-GEXAVXFXXXP 812
P P PP+P P P A+ P P PPPP + V
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAP-VKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSR 217
Query: 813 PXXXPPPTXPPP 848
P PP P
Sbjct: 218 PSSFAPPAGHAP 229
Score = 26.2 bits (55), Expect = 7.1
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 10/77 (12%)
Frame = +3
Query: 771 PPPGEXAVXFXXXP-----PXXXP--PPTXPPPPXXXRXGTGFXXXPGGXXXXPP---XP 920
PPP + A P P P PP PPPP P PP P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSS--FAPPAGHAP 229
Query: 921 RGXXXSPXFXPRAPXXP 971
SP F R P P
Sbjct: 230 NVTSESPKFPNRGPSIP 246
>SPAC29B12.10c |||OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 123 LCWLWPTLKETATNLLTTARTSL-ILPKTTTLMETATNLSTTVHITWTV 266
LCW+WP K N L + L ILP T + N + W +
Sbjct: 361 LCWIWP--KNRVVNQLFGYNSGLGILPLTFDWQQVVYNSNPLASPWWVI 407
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 756 P*XTPPPPGEXAVXFXXXPPXXXPPPTXPPPP 851
P PPPP PP PP+ PPPP
Sbjct: 5 PPGNPPPP---------PPPPGFEPPSQPPPP 27
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 200 KDYNPNGNGYEPIDNGAYYVDRPQGRP 280
K Y +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 907 LPPXPGAXXPPXXFXPGPPXXPP 975
LPP PGA P PP PP
Sbjct: 505 LPPIPGAPGMPNLNMSQPPMVPP 527
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,017,394
Number of Sequences: 5004
Number of extensions: 58581
Number of successful extensions: 239
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 507285244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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