BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A05
(1023 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0382 - 22501041-22501279,22501717-22501810 36 0.052
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 36 0.068
03_06_0471 + 34169562-34169892,34170121-34170347 33 0.48
06_02_0247 - 13465763-13466227 32 0.64
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 32 0.84
12_02_0299 - 17051570-17052474,17053542-17053755 29 1.5
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 31 1.9
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 31 1.9
07_01_0080 + 587674-588510 31 1.9
06_01_0194 + 1503350-1503554,1504399-1504490,1504835-1504935,150... 31 1.9
05_05_0219 + 23371561-23371680,23371799-23372207,23374520-233746... 31 1.9
07_03_1764 + 29322683-29323387,29323809-29323889,29323968-293240... 30 2.6
01_01_0046 - 331758-332627 30 2.6
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 25 3.1
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 30 3.4
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474... 30 3.4
07_03_0560 + 19479597-19480667 30 3.4
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 30 3.4
06_01_0178 + 1386981-1387505 30 3.4
02_01_0158 - 1103461-1104186 30 3.4
12_02_1174 - 26696869-26698191 29 4.5
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 4.5
09_03_0130 - 12609417-12610462,12610786-12611040,12611139-126112... 29 4.5
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 29 4.5
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 4.5
02_03_0279 + 17250347-17252098 29 4.5
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668... 29 4.5
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 29 5.9
03_06_0599 + 34984869-34985319,34986581-34987563 29 5.9
03_02_0738 - 10824121-10825572 29 5.9
03_01_0515 - 3864796-3865425 29 5.9
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160... 29 5.9
01_06_1827 + 40169001-40169263,40169358-40169472,40170090-401702... 29 5.9
01_06_1521 + 37956131-37957204,37958560-37958962,37959370-379594... 29 5.9
12_01_0838 - 7830944-7831444 29 7.9
09_03_0145 - 12749288-12751510 29 7.9
07_03_1136 + 24218601-24218734,24218769-24219906 29 7.9
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 29 7.9
04_04_1687 - 35365766-35366356,35367137-35368135 29 7.9
04_03_1022 - 21778315-21779007 29 7.9
03_05_0535 + 25352283-25352562,25352661-25352788,25352928-253530... 29 7.9
02_05_0686 - 30900748-30902167,30903442-30904742 29 7.9
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 35.9 bits (79), Expect = 0.052
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +3
Query: 93 KFFMIFVLALLA--MANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI 266
K ++F L L A +A+A+ +N +E P +PP P+ + Y+P
Sbjct: 11 KALLVFALLLAAAFVASAEQTHDDGDNPPESPDHEDPPPSPEYYDPP----PSPDYYDPP 66
Query: 267 DNGAYYVDPPQGRPYFKPTPFPGARGG 347
+ YY DPP Y+ P P P GG
Sbjct: 67 HSPDYY-DPPPSPDYYDPPPSPYYGGG 92
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 35.5 bits (78), Expect = 0.068
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +3
Query: 147 PVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDPPQGRPYFK 317
P + + Y P + P V PP Y P +G P N + Y +PP GRP
Sbjct: 381 PPAAPQQPEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSG 439
Query: 318 PTPFPGARG 344
P P GA G
Sbjct: 440 PPPSYGAGG 448
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 32.7 bits (71), Expect = 0.48
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +3
Query: 186 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG---RPYFKPTPFPG 335
Y P P PP Y P+ GY P GAY PP G +P + P +PG
Sbjct: 56 YPPAGGYPGAQYPPSGYPPSQGGYPP---GAY---PPSGYPQQPGYPPAGYPG 102
>06_02_0247 - 13465763-13466227
Length = 154
Score = 32.3 bits (70), Expect = 0.64
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -1
Query: 912 RXRRXGGGXXXGFGGGGG 859
R RR GGG GFGGGGG
Sbjct: 19 RCRRGGGGEVAGFGGGGG 36
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 31.9 bits (69), Expect = 0.84
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLLXRGXXP 925
PPPPP P PPP + +G P
Sbjct: 365 PPPPPPPRPPPPPPPIKKGAPP 386
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLLXRGXXPXXSXXRXXXPXSP 964
PPPPP P PPP R P + P +P
Sbjct: 355 PPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAP 389
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 857 SPPPPPKPXXXPPP 898
SPPPPP P PPP
Sbjct: 319 SPPPPPPPPPPPPP 332
Score = 27.5 bits (58), Expect(2) = 1.5
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLLXRGXXPXXSXXRXXXPXSPXTRXSRRN 988
P PPP P PPP P + P P + SR++
Sbjct: 318 PSPPPPPPPPPPPPPSFPWPFPPLAPLFPPYPSPPPSMYSRKD 360
Score = 22.2 bits (45), Expect(2) = 1.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 857 SPPPPPKP 880
SPPPPP P
Sbjct: 288 SPPPPPPP 295
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 800 PXTPRXRXXAXAXLLXXXXSPPPPPKPXXXPPP 898
P PR A PPPPP+P PPP
Sbjct: 594 PRVPRPPPAPSATANTASALPPPPPRPPGAPPP 626
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 857 SPPPPPKPXXXPPPXL 904
SPPPPP P PPP L
Sbjct: 81 SPPPPPPPPPPPPPPL 96
>07_01_0080 + 587674-588510
Length = 278
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLLXR 913
PPPPP P PPP L R
Sbjct: 108 PPPPPPPPPPPPPPLFTR 125
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLLXRGXXP 925
PPPPP P PPP R P
Sbjct: 109 PPPPPPPPPPPPPLFTRRSHAP 130
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 857 SPPPPPKPXXXPPP 898
SPPPPP P PPP
Sbjct: 103 SPPPPPPPPPPPPP 116
>06_01_0194 +
1503350-1503554,1504399-1504490,1504835-1504935,
1506186-1506276,1506616-1506674,1506764-1506884,
1506959-1507027,1507321-1507373,1507688-1507796,
1507895-1508065,1508148-1508306,1508561-1508650,
1508751-1508933,1509837-1510027,1510340-1510787
Length = 713
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -1
Query: 954 GXXXRXXEXXGXXPRXRRXGGGXXXGFGGGGGEXXXXRRXAXAXXRXRG 808
G R G R R GGG G GGGGG R R RG
Sbjct: 665 GSRGRGRGRGGGGGRGRGGGGGGGRGGGGGGGGGRGGRGRGRGRGRGRG 713
>05_05_0219 +
23371561-23371680,23371799-23372207,23374520-23374635,
23375385-23375855
Length = 371
Score = 30.7 bits (66), Expect = 1.9
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Frame = +3
Query: 93 KFFMIFVLALLAMANAQDPVKVVENADSGNGYEPIDNRPYIV----NPPKDYNPNGNGYE 260
+F + V+ LLA+A P A G P + P K+ + NG
Sbjct: 5 RFAAVVVVLLLALALIPGPAAAAGRALQGEKARPSEAAPAPTVAAGGSHKESAKSSNGQN 64
Query: 261 PIDNGAYYVDPPQGRPYFKPTPFP 332
P+ ++ PP +P TP P
Sbjct: 65 PVTKETHHQTPPPAKPPKDQTPPP 88
>07_03_1764 +
29322683-29323387,29323809-29323889,29323968-29324072,
29324453-29325382,29326728-29326856,29326953-29327042,
29327237-29327293,29327362-29327394
Length = 709
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -1
Query: 903 RXGGGXXXGFGGGGGEXXXXRRXAXAXXRXRG 808
R GGG G GGGGG RR A RG
Sbjct: 5 RYGGGGGGGGGGGGGSGSGHRRDRYAEGGRRG 36
>01_01_0046 - 331758-332627
Length = 289
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 857 SPPPPPKPXXXPPPXLLXRGXXPXXSXXRXXXPXSPXTR 973
SPPPPP P PPP R P R P P R
Sbjct: 20 SPPPPPPP--PPPPPSSSRYRPPSPPSSRHPHPTIPAAR 56
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 25.4 bits (53), Expect(2) = 3.1
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPPPKPXXXPPPXLLXRG 916
PPPP P PPP + G
Sbjct: 251 PPPPPPPPGPPPREIVPG 268
Score = 24.6 bits (51), Expect(2) = 5.2
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 800 PXTPRXRXXAXAXLLXXXXSPPPPPKP 880
P P+ A A L PPPPP P
Sbjct: 234 PPPPKPANIAGAPGLPLPPPPPPPPGP 260
Score = 23.0 bits (47), Expect(2) = 3.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 860 PPPPPKP 880
PPPPPKP
Sbjct: 233 PPPPPKP 239
Score = 23.0 bits (47), Expect(2) = 5.2
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 860 PPPPPKPXXXPP 895
PPPPP+P P
Sbjct: 274 PPPPPRPLQPSP 285
>10_08_0495 -
18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 29.9 bits (64), Expect = 3.4
Identities = 20/59 (33%), Positives = 24/59 (40%)
Frame = +3
Query: 135 NAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPY 311
+AQ P V DS GY + RP P Y P G + GA PP G P+
Sbjct: 762 HAQGPYGVPPGGDSRPGYSQPEQRPAYSQP---YPPYGAPPQQPPYGAPSQQPPYGAPH 817
>09_04_0424 +
17444261-17444665,17445974-17446367,17447367-17447425,
17447507-17447637,17447737-17447833,17447936-17448100
Length = 416
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLLXRG 916
PPPPP+P PPP + G
Sbjct: 75 PPPPPQPRAAPPPVAVAMG 93
>07_03_0560 + 19479597-19480667
Length = 356
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -2
Query: 1019 GXXXGXGVXGXXGERXGXWXXXGXXRGXXKXXXVGPXGGGXGGG 888
G G G G G G G +G VG GGG GGG
Sbjct: 80 GLGGGGGFGGGGGAGGGGGLGGGGGKGGGFGGGVGGGGGGEGGG 123
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +3
Query: 204 RPYIVNP---PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKP 320
+PY P P P G Y P G Y PP+G+P + P
Sbjct: 266 QPYPPKPQGQPYPPQPQGQPYPPQPYGQTYPPPPKGQPTYPP 307
>06_01_0178 + 1386981-1387505
Length = 174
Score = 29.9 bits (64), Expect = 3.4
Identities = 17/54 (31%), Positives = 20/54 (37%)
Frame = -1
Query: 1020 GRXGGXGGXWXXRREXRVXGXXGXXXRXXEXXGXXPRXRRXGGGXXXGFGGGGG 859
G GG GG + G G G + R+ G G G GGGGG
Sbjct: 43 GGGGGGGGGGGAGGKGGKGGAGGHGGAGGGGGGGGGKGRKGGAGGHGGAGGGGG 96
>02_01_0158 - 1103461-1104186
Length = 241
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = -1
Query: 1002 GGXWXXRREXRVXGXXGXXXRXXEXXGXXPRXRRXGGGXXXGFGGGGG 859
GG W R G G + E G R GGG G GGGGG
Sbjct: 108 GGSWGGGRRSGGGGPGGGCFKCGES-GHMARDCFNGGGVGVGGGGGGG 154
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLLXRGXXPXXSXXRXXXPXSPXTR 973
PPPPP+P PP + + P S P P TR
Sbjct: 161 PPPPPRPPSVKPPVVQPK-PQPPPSLQPPSPPPPPPTR 197
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +3
Query: 192 PIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 332
P + P IV P Y P+ YEP Y +PP PY P FP
Sbjct: 636 PYPSPPDIVPSPPSYEPSPPSYEP-SPPEYAPEPPVYAPY-PPGIFP 680
>09_03_0130 -
12609417-12610462,12610786-12611040,12611139-12611253,
12611376-12611428,12611854-12612114,12612252-12612302,
12612412-12612660,12612779-12613007,12613292-12613666
Length = 877
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 857 SPPPPPKPXXXPPPXL 904
+PPPPP P PPP L
Sbjct: 13 APPPPPPPPPPPPPPL 28
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLLXRGXXPXXSXXRXXXPXSPXT 970
PPPPP P PPP + + S P P T
Sbjct: 365 PPPPPPPPPPPPPPAVTQQQDVKTSCGPAVPPPPPPT 401
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLLXRGXXP 925
PPPPP P PPP L P
Sbjct: 352 PPPPPPPPPPPPPPKLNTAPKP 373
>02_03_0279 + 17250347-17252098
Length = 583
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 857 SPPPPPKPXXXPPP 898
SPPPPP P PPP
Sbjct: 123 SPPPPPPPPPPPPP 136
>01_05_0501 +
22764978-22765896,22766087-22766349,22766613-22766836,
22767419-22767749,22767968-22768372
Length = 713
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 857 SPPPPPKPXXXPPP 898
SPPPPP P PPP
Sbjct: 75 SPPPPPPPPPPPPP 88
>06_01_0039 -
386576-387098,387173-387468,387744-388067,388165-388276,
388355-388482,388914-389048,389122-389250,389620-389787,
389897-390019,390099-390227,390543-390866,390946-392901
Length = 1448
Score = 29.1 bits (62), Expect = 5.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 857 SPPPPPKPXXXPPP 898
+PPPPP+P PPP
Sbjct: 47 APPPPPQPHTAPPP 60
>03_06_0599 + 34984869-34985319,34986581-34987563
Length = 477
Score = 29.1 bits (62), Expect = 5.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 857 SPPPPPKPXXXPPP 898
+PPPPP+P PPP
Sbjct: 397 APPPPPQPPPPPPP 410
>03_02_0738 - 10824121-10825572
Length = 483
Score = 29.1 bits (62), Expect = 5.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXL 904
PPPPP P PPP L
Sbjct: 94 PPPPPPPSSPPPPAL 108
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 5.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 857 SPPPPPKPXXXPPP 898
SPPPPP P PPP
Sbjct: 82 SPPPPPLPPPPPPP 95
>02_04_0567 -
23914330-23914461,23915016-23915136,23915954-23916048,
23916131-23916301,23917291-23917380,23917636-23918139
Length = 370
Score = 29.1 bits (62), Expect = 5.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXL 904
PPPPP P PPP L
Sbjct: 43 PPPPPPPPPPPPPPL 57
>01_06_1827 +
40169001-40169263,40169358-40169472,40170090-40170201,
40170556-40170623,40170798-40170852,40170948-40171027,
40171811-40171924,40172178-40172296,40173064-40173181,
40173264-40173394,40173535-40173688,40173922-40174017
Length = 474
Score = 29.1 bits (62), Expect = 5.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXL 904
PPPPP P PPP L
Sbjct: 34 PPPPPAPPPPPPPRL 48
>01_06_1521 + 37956131-37957204,37958560-37958962,37959370-37959471,
37959569-37959792
Length = 600
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -1
Query: 1020 GRXGGXGGXWXXRREXRVXGXXGXXXRXXEXXGXXPRXRRXGGGXXXGFGGGGG 859
G GG GG + G PR GGG G GGGGG
Sbjct: 46 GGGGGGGGGGGEEEDGEEGGDQHFSLLGHALCVKRPRRALYGGGGGGGAGGGGG 99
>12_01_0838 - 7830944-7831444
Length = 166
Score = 28.7 bits (61), Expect = 7.9
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = -2
Query: 1019 GXXXGXGVXGXXGERXGXWXXXGXXRGXXKXXXVGPXGGGXGGGXXXVLXXXXXXXXXXX 840
G G G G G G G +G G GGG GGG
Sbjct: 75 GGGGGGGGGGSNGSGSGSGYGYGYGQGNGGAQGQGSGGGGGGGGGGGGGGSGQGSGSGYG 134
Query: 839 GXXGPXGGXGG 807
G GG GG
Sbjct: 135 YGYGKGGGGGG 145
>09_03_0145 - 12749288-12751510
Length = 740
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLL 907
PPPPP P PPP L
Sbjct: 31 PPPPPPPGIQPPPPAL 46
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 924 GXXPRXRRXGGGXXXGFGGGGGEXXXXRR 838
G P GGG G GGGGGE R
Sbjct: 192 GGGPGRAPGGGGGGGGLGGGGGEGGAPER 220
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 28.7 bits (61), Expect = 7.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 860 PPPPPKPXXXPPP 898
PPPPP+P PPP
Sbjct: 58 PPPPPQPAKEPPP 70
>04_04_1687 - 35365766-35366356,35367137-35368135
Length = 529
Score = 28.7 bits (61), Expect = 7.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 857 SPPPPPKPXXXPPPXL 904
+PPPPP P PPP +
Sbjct: 9 APPPPPPPPPPPPPPI 24
>04_03_1022 - 21778315-21779007
Length = 230
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 800 PXTPRXRXXAXAXLLXXXXSPPPPPKPXXXPPPXLLXRGXXP 925
P P R PPPPP P PP LL P
Sbjct: 18 PPPPATRARPPCSSAHLLPPPPPPPPPPPYVPPHLLPPSPAP 59
>03_05_0535 +
25352283-25352562,25352661-25352788,25352928-25353081,
25353182-25353379,25353467-25353618
Length = 303
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 906 RRXGGGXXXGFGGGGGEXXXXRR 838
RR GGG G GGGGG RR
Sbjct: 25 RRSGGGGGGGGGGGGGGGAVVRR 47
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 812 RXRXXAXAXLLXXXXSPPPPPKPXXXPPP 898
R + A A + PPPPPKP PP
Sbjct: 299 RPQSIAAAAVASPAPPPPPPPKPAAAAPP 327
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,934,909
Number of Sequences: 37544
Number of extensions: 468740
Number of successful extensions: 7724
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6254
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3001039372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -