Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A05
(1023 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 39 0.007
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 34 0.19
Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical pr... 33 0.33
AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical ... 33 0.33
AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical ... 33 0.33
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 33 0.43
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 32 0.76
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 1.8
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 30 2.3
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 2.3
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 2.3
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 2.3
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 29 5.3
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 5.3
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 5.3
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 5.3
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 7.1
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 7.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 7.1
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 29 7.1
AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical ... 29 7.1
AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical ... 29 7.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z82284-1|CAB05287.1| 226|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z82262-1|CAB05151.2| 361|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 9.3
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 28 9.3
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 28 9.3
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 9.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 9.3
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 9.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 9.3
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 38.7 bits (86), Expect = 0.007
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +1
Query: 118 LCWLWPTLKTPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHI---TW 288
LC+LW L T T T T T+ + T T++++ TTT +TTV + T
Sbjct: 179 LCYLWVPLTTTTT--TTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTT 236
Query: 289 TLPKADLTSSLPLS 330
T+P + T++ PL+
Sbjct: 237 TVPTNETTTTSPLN 250
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical protein
F58G11.2 protein.
Length = 960
Score = 33.9 bits (74), Expect = 0.19
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -1
Query: 1020 GRXGGXGGXWXXRREXRVXGXXGXXXRXXEXXGXXPRXRRXGGGXXXGFGGGGG 859
G GG GG + R G G R + G GGG G GGGGG
Sbjct: 809 GGYGGRGGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGGGGSFGGSGGGGG 862
>Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 156 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 296
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 156 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 296
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical
protein Y81G3A.1 protein.
Length = 243
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 156 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 296
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 32.7 bits (71), Expect = 0.43
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +1
Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 321
T TQ+ T+ TT ++ +P TTT E AT T T LPK L L
Sbjct: 117 TTTQKPTTSTTTTTTSTTPVPTTTTTTEAATTTVLTT-TTEELPKQQLAGRL 167
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +1
Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLS 330
T T+E T T+ P TTT T T T T P T+ PL+
Sbjct: 325 TTTEEATTTTEEITTTTTKAPTTTTTQSTTTTTQLPTTTTTTEPTTTTTTVDPLA 379
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 31.9 bits (69), Expect = 0.76
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 133 PTLKTPLR*WKTLTQETA--TNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKAD 306
PT L T T+ TA T + T ART+ P TTT + + T L TT+ + + D
Sbjct: 368 PTTSLALETTTTATRTTAKITAVATVARTNTTQPPTTTPLSSTTALPTTLTSSSSTESTD 427
Query: 307 LTSS 318
+S+
Sbjct: 428 GSST 431
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 31.5 bits (68), Expect = 1.0
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS-SLPLSLV 336
T T T T TT T+ P TTT T T +TT T T P T+ S PL+ V
Sbjct: 89 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTT--TTTPTTTTTTPTTTTTTRSTPLTEV 144
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +1
Query: 172 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 297
T T T TT+ T+ P TTT T STT T T P
Sbjct: 61 TTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 297
T T T+T TT T TTT T T +T T T+P
Sbjct: 86 TPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMP 129
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +1
Query: 163 KTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSS 318
KT Q T T + TT RTS +P TTT + + T P D T +
Sbjct: 288 KTNPQITTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFSTTTRQPNFDKTKT 339
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/63 (34%), Positives = 26/63 (41%)
Frame = +1
Query: 136 TLKTPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS 315
T TP +T T+ T TT T P TTT T T + T T T K T+
Sbjct: 255 TTTTPTTTTQTTTKPT-----TTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTT 309
Query: 316 SLP 324
S P
Sbjct: 310 STP 312
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 169 LTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 321
L ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 300 LPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +1
Query: 130 WP----TLKTPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTV 276
WP T+ P T T +T +TT T P TTT TA +TT+
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 169 LTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 321
L ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 300 LPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +1
Query: 130 WP----TLKTPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTV 276
WP T+ P T T +T +TT T P TTT TA +TT+
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 1019 GXXXGXGVXGXXGERXGXWXXXGXXRGXXKXXXVGPXGGGXGGG 888
G G G G G R G W G G GGG GGG
Sbjct: 54 GWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGG 97
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -1
Query: 1020 GRXGGXGGXWXXRREXRVXGXXGXXXRXX--EXXGXXPRXRRXGGGXXXGFGGGGG 859
G GG GG W G G G R GGG G GGGGG
Sbjct: 63 GWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGG 118
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.3
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 860 PPPPPKPXXXPPP 898
PPPPPKP PPP
Sbjct: 92 PPPPPKPTIRPPP 104
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.3 bits (65), Expect = 2.3
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 860 PPPPPKPXXXPPP 898
PPPPPKP PPP
Sbjct: 314 PPPPPKPTIRPPP 326
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT--WTLPKADLTSSLP 324
T + T T TT T+ P TTT T T +TT+ T T P T++ P
Sbjct: 299 TESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKP 353
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +1
Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNL-STTVHITWTLPKADLTSS 318
T T T TT TS P TTT T T STT T T+ T++
Sbjct: 292 TTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTT 343
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical protein
F43C1.1 protein.
Length = 1036
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 857 SPPPPPKPXXXPPP 898
SPPPPP P PPP
Sbjct: 960 SPPPPPLPSSTPPP 973
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.1 bits (62), Expect = 5.3
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +1
Query: 148 PLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPL 327
PLR T+ T+T+ TT + P TTT + + T STT T T PK ++S
Sbjct: 576 PLRKVSTVPPTTSTSSTTTQK-----PSTTTTVPSTTPTSTTT-TTTTTPKPTTSTSTST 629
Query: 328 S 330
S
Sbjct: 630 S 630
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.1 bits (62), Expect = 5.3
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +1
Query: 148 PLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPL 327
PLR T+ T+T+ TT + P TTT + + T STT T T PK ++S
Sbjct: 576 PLRKVSTVPPTTSTSSTTTQK-----PSTTTTVPSTTPTSTTT-TTTTTPKPTTSTSTST 629
Query: 328 S 330
S
Sbjct: 630 S 630
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -1
Query: 1020 GRXGGXGGXWXXRREXRVXGXXGXXXRXXEXXGXXPRXRRXGGGXXXGFGGGGG 859
G GG G W R G G G R GGG G GGGG
Sbjct: 23 GGWGGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGG 76
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXL 904
PPPPP P PPP L
Sbjct: 786 PPPPPVPPPPPPPFL 800
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 160 WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 291
WK T TT + + PK TTL +T T +T+ T T
Sbjct: 134 WKKFTTTEEPLETTTTKRIITTPKRTTLRKTTTTTTTSTTSTST 177
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 863 PPPPKPXXXPPPXLLXRGXXPXXSXXRXXXPXSP 964
PPPP P PPP + G P P P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.7 bits (61), Expect = 7.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 857 SPPPPPKPXXXPPP 898
+PPPPP P PPP
Sbjct: 133 APPPPPSPPPPPPP 146
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 800 PXTPRXRXXAXAXLLXXXXSPPPPPKPXXXPPP 898
P P + A PPPPP P PPP
Sbjct: 113 PPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPP 145
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -1
Query: 1011 GGXGGXWXXRREX--RVXGXXGXXXRXXEXXGXXPRXRRXGGGXXXGFGGGGG 859
GG GG + R++ G G + + GGG G+GGGGG
Sbjct: 788 GGGGGGYNDRQDFGRNYGGRDGGGPQRYHDQQQQRQGGYQGGGYGGGYGGGGG 840
>AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical
protein R06B10.1 protein.
Length = 1236
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = +3
Query: 171 DSGNGYEPIDNRPYIVNPPKDYNPNGNGY--EPIDNGAYY---VDPPQ 299
D+ N Y+P++ +VNP K + NG+ + + + A Y VDPP+
Sbjct: 824 DNANAYKPMNPIEMVVNPTKYAKKSSNGFMEKVVKDIAEYPKPVDPPK 871
>AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical
protein R52.6 protein.
Length = 151
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTL 294
TL E T ++TT TS + K M AT + WTL
Sbjct: 47 TLPYEETTEMMTTMETSTMTEKVCPEMPAATACMDLTTLGWTL 89
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 9.3
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 857 SPPPPPKPXXXPPP 898
+PPPPP P PPP
Sbjct: 356 APPPPPPPPPPPPP 369
>Z82284-1|CAB05287.1| 226|Caenorhabditis elegans Hypothetical
protein T27E7.1 protein.
Length = 226
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +3
Query: 162 ENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYE--PIDNGAYYVDPPQGRPYFKPT--PF 329
+N G + P N + N P + GY P PP+G Y++P P+
Sbjct: 34 QNPQPGASFPP--NMNPVTNGPGSWTQKPGGYNNGPGSGSFKSTKPPRGLVYYQPKNYPY 91
Query: 330 PGARGGK 350
+GGK
Sbjct: 92 KPGKGGK 98
>Z82262-1|CAB05151.2| 361|Caenorhabditis elegans Hypothetical
protein C43F9.4 protein.
Length = 361
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +3
Query: 96 FFMIFVLALLAMANAQD---PVKVVENADSGNGYEPIDNRPYI 215
F++IF++ ++ M + D P+ +N D N +EP RP+I
Sbjct: 29 FWVIFIVIIVVMTHFNDYSEPIVPWDNCDMNNTWEP-TTRPFI 70
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 28.3 bits (60), Expect = 9.3
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 166 TLTQETATNLLTT----ARTSLILPKTTTLMETATNLSTTVHITWTLP-KADLTSSLP 324
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 497 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 553
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 28.3 bits (60), Expect = 9.3
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 166 TLTQETATNLLTT----ARTSLILPKTTTLMETATNLSTTVHITWTLP-KADLTSSLP 324
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 338 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 394
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical protein
T28C6.1 protein.
Length = 281
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -2
Query: 1007 GXGVXGXXGERXGXWXXXGXXRGXXKXXXVGPXGGGXGG 891
G G G G W G +G + GP G G GG
Sbjct: 215 GGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGPGGWGGGG 253
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLLXRGXXPXXSXXRXXXPXSPXTR 973
PPPPP PPP G P P P +R
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 28.3 bits (60), Expect = 9.3
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 166 TLTQETATNLLTT----ARTSLILPKTTTLMETATNLSTTVHITWTLP-KADLTSSLP 324
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 378 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 434
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 28.3 bits (60), Expect = 9.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 860 PPPPPKPXXXPPP 898
PPPPP P PPP
Sbjct: 20 PPPPPSPRRAPPP 32
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 9.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXL 904
PPPPP P PPP +
Sbjct: 74 PPPPPMPCPPPPPPM 88
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLLXRGXXPXXSXXRXXXPXSPXTR 973
PPPPP PPP G P P P +R
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLLXRGXXPXXSXXR 943
PPPPP P PPP P S R
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSSNAR 29
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 860 PPPPPKPXXXPPPXLLXRGXXPXXSXXR 943
PPPPP P PPP P S R
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPPSSNAR 29
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,590,244
Number of Sequences: 27780
Number of extensions: 314654
Number of successful extensions: 2544
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2159
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2699257404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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