Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A02
(912 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1433 + 26513728-26514135,26525534-26526280 33 0.24
07_03_1432 - 26508135-26508881,26509301-26509708 33 0.42
02_05_0686 - 30900748-30902167,30903442-30904742 31 0.96
11_01_0066 - 536281-537196,537397-537452 30 2.2
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 2.2
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 30 2.9
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 2.9
03_05_0576 + 25765137-25766420 29 3.9
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 29 5.1
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 29 6.8
11_06_0610 - 25449085-25453284 29 6.8
11_01_0752 - 6327269-6327764,6328571-6328839 28 9.0
08_01_1010 - 10215625-10216335,10216372-10216473 28 9.0
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 28 9.0
>07_03_1433 + 26513728-26514135,26525534-26526280
Length = 384
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 322 PINXGGPCSXNPLPF*XXPPPRSPXPAXXPFSPXXXSXAXFPPPTGVXPXP 474
PI P S +P PPP S P+ P SP + +PPP+ P P
Sbjct: 31 PITYPSPPSLSPSMPPTYPPPSSTPPSPAPVSPSPPT--TYPPPSTTPPNP 79
>07_03_1432 - 26508135-26508881,26509301-26509708
Length = 384
Score = 32.7 bits (71), Expect = 0.42
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +1
Query: 322 PINXGGPCSXNPLPF*XXPPPRSPXPAXXPFSPXXXSXAXFPPPTGVXPXP 474
PI P S +P PPP S P+ P SP + P PT P P
Sbjct: 31 PITYPSPPSLSPSTPPTYPPPSSTPPSLAPVSPSPPTTYLPPSPTPPSPAP 81
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 0.96
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 376 PPPRSPXPAXXPFSPXXXSXAXFPPPTGVXPXPX*KXP 489
PPP P A P P + PPP G P P K P
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGP 353
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = +1
Query: 355 PLPF*XXPPPRSPXPAXXPFSPXXXSXAXFPPPTGVXPXPX*KXPXGGXS 504
P P PPP + P P P S PPP G P P GG S
Sbjct: 339 PPPKGPPPPPPAKGPPPPP-PPKGPSPPPPPPPGGKKGGPPPPPPKGGAS 387
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 355 PLPF*XXPPPRSPXPAXXPFSPXXXSXAXFPPPT 456
PLP PPP P P SP S A PPP+
Sbjct: 209 PLPPASPPPPSIATPPPSPASPPPPSTATPPPPS 242
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = +1
Query: 322 PINXGGPCSXNPLPF*XXPPPRSPXPAXXPFSPXXXSXAXFPPPTGVXPXPX*KXPXGGX 501
P GGP P P PPP++P P P +P PPP G P P
Sbjct: 258 PNGSGGPPRPPP-PQVPPPPPQAPPPPP-PNAPMGMPPRIPPPPVGGTQPPPPPPPLANG 315
Query: 502 SP 507
P
Sbjct: 316 PP 317
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +1
Query: 322 PINXGGPCSXNPLPF*XXPPPRSPXPAXXPFSPXXXSXAXFPPPTGVXPXP 474
P++ P + P P PPP SP PA P S PPP P P
Sbjct: 47 PVSSAAPTAPPPKPS-PTPPPASPPPAPTPPQTRPPS----PPPQQQQPRP 92
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 340 PCSXNPLPF*XXPPPRSPXPAXXPFSPXXXSXAXFPPPTGVXP 468
P S +P P PPP +P P P +P S + P P P
Sbjct: 103 PASISPTPAPPLPPPPAPAPPPTP-TPKFPSSSANPSPPDAYP 144
>03_05_0576 + 25765137-25766420
Length = 427
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +1
Query: 340 PCSXNPLPF*XXPPPRSPXPAXXPFSPXXXSXAXFPPPTGVXPXP 474
P S +P P PPP+ P P SP + PPT P P
Sbjct: 68 PPSPSPSPS-PSPPPQPSSPPPPPPSPPPAAAVSVSPPTQPRPRP 111
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +1
Query: 340 PCSXNPLPF*XXPPPRSPXPAXXPFSPXXXSXAXFPPPTGVXPXPX*KXPXGGXSP 507
P S +P P PPP SP P+ P S + PP+ P GG P
Sbjct: 1145 PSSQSPPPG-SSPPPASPPPSTPSAPPTNSSGSAPSPPSPSQSAPPANTGGGGSPP 1199
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 340 PCSXNPLPF*XXPPPRSPXPAXXPFSPXXXSXAXFPPPTGVXP 468
P P P PP + P P P +P F P GV P
Sbjct: 63 PPGARPFPGSPPPPSQPPPPFARPAAPVQQQPPPFGGPPGVMP 105
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +1
Query: 355 PLPF*XXPPP-RSPXPAXXPFSPXXXSXAXFPPPTGVXPXPX*KXP 489
P P PPP +SP P SP + PP + P P K P
Sbjct: 1155 PAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSP 1200
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +1
Query: 355 PLPF*XXPPP-RSPXPAXXPFSPXXXSXAXFPPPTGVXPXPX*KXP 489
P P PPP +SP P SP + PP + P P K P
Sbjct: 1187 PAPVILPPPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSP 1232
>11_01_0752 - 6327269-6327764,6328571-6328839
Length = 254
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +1
Query: 382 PRSPXPAXXPFSPXXXSXAXFPPPTGVXPXPX*KXPXGGXSP 507
P + P+ P SP + PPPT P P G SP
Sbjct: 71 PAASSPSFSPASPSCPAKLRSPPPTSGEPSAVHASPPTGGSP 112
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +1
Query: 376 PPPRSPXPAXXPFSPXXXSXAXFPPPTGVXPXPX*KXPXGGXSP 507
PPPR+ P P SP + + P+ P P G SP
Sbjct: 184 PPPRAASPDYTPLSPPPRAASPEYSPSTPPPSPVPSDAESGTSP 227
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +1
Query: 322 PINXGGPCSXNPLPF*XXPPPRSPXPAXXPFSPXXXSXAXFPPPTGVXPXPX*KXPXGGX 501
P GG CS +P P P P S SP +PP + P GG
Sbjct: 476 PSTPGGGCSSSPTPCDAPPSPSSDT------SPTTPGGGYYPPTPSIGTSPSTPGTGGGY 529
Query: 502 SP 507
P
Sbjct: 530 YP 531
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,795,568
Number of Sequences: 37544
Number of extensions: 240263
Number of successful extensions: 1033
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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