Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_H06
         (386 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110485-23|CAB60377.3|  770|Caenorhabditis elegans Hypothetical...    29   1.5  
Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical pr...    28   2.6  
Z12017-2|CAA78048.1|  455|Caenorhabditis elegans Hypothetical pr...    27   3.5  
AF039047-10|AAB94229.2|  400|Caenorhabditis elegans Hypothetical...    27   4.6  
Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z78544-4|CAB01762.3|  374|Caenorhabditis elegans Hypothetical pr...    27   6.1  
U67953-5|AAL13330.2|  287|Caenorhabditis elegans Male abnormal p...    27   6.1  
AY742796-1|AAW59416.1|  287|Caenorhabditis elegans MAB-7 protein.      27   6.1  

>AL110485-23|CAB60377.3|  770|Caenorhabditis elegans Hypothetical
           protein Y46G5A.29 protein.
          Length = 770

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +1

Query: 25  TDTRSNRDISNSF*GFRNNHSNC-NIY--YKCQYCDNN*KRWKGKFCRWMCYRIYAHCR- 192
           T  R  R+I+        N + C +++  Y+C   D     W G+ C   C  IY  CR 
Sbjct: 473 TGRRCEREINECGWNSCKNGAKCVDLFNDYRCDCADG----WMGRNCERPCQDIYGSCRV 528

Query: 193 WK 198
           WK
Sbjct: 529 WK 530


>Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical
           protein F55H12.1 protein.
          Length = 768

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = +1

Query: 217 IVGYFYLNNICFIIVYILNIFVLGPLR*LNPVYSYNISY 333
           ++G +Y+  I +I++YI+NIF +  +   +  ++ N  Y
Sbjct: 200 VIGVYYMILISWIVLYIINIFYVNNMGRCDNPWNQNNCY 238


>Z12017-2|CAA78048.1|  455|Caenorhabditis elegans Hypothetical
           protein R08D7.2 protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 133 KRWKGKFCRWMCYRIYAHCRWKM*TH-LWIVG 225
           ++ + KFC  MCY+  +  R ++  H LWI G
Sbjct: 90  RKQRAKFCSEMCYQKSSFVRKQLDEHPLWITG 121


>AF039047-10|AAB94229.2|  400|Caenorhabditis elegans Hypothetical
           protein K11D12.9 protein.
          Length = 400

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 145 PSIFFSCCHNTDTCSRCYSLS 83
           PSI F  C +  TCS CY  S
Sbjct: 360 PSIVFMPCRHLITCSGCYDAS 380


>Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical
           protein K05D4.2 protein.
          Length = 338

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +1

Query: 214 WIVGYFYLNNICFIIVYILNIFVLGPLR*L-NPVYSYNISYVLY 342
           W+   FY   + FI+  ILN+ +L  ++ + N V+  N  Y+++
Sbjct: 6   WLTFNFYAETVGFILSVILNVILLTLIKGMPNKVFG-NYKYLMF 48


>Z78544-4|CAB01762.3|  374|Caenorhabditis elegans Hypothetical
           protein K04G11.5 protein.
          Length = 374

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 139 WKGKFCR-WMCYRIYAHCRWKM*THLWIVGYFYLNNICFIIVYILN 273
           +K ++CR W  + +   C W+    L+++G+     I  +I Y+++
Sbjct: 61  YKWRYCRNW--FHLIIECNWRTICILFLLGFIVSWTIFAVIYYVIS 104


>U67953-5|AAL13330.2|  287|Caenorhabditis elegans Male abnormal
           protein 7 protein.
          Length = 287

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
 Frame = +1

Query: 139 WKGKFCRWMCYRIYAHC-RW 195
           W G++C   C  IY  C RW
Sbjct: 62  WMGRYCHRKCRNIYKSCDRW 81


>AY742796-1|AAW59416.1|  287|Caenorhabditis elegans MAB-7 protein.
          Length = 287

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
 Frame = +1

Query: 139 WKGKFCRWMCYRIYAHC-RW 195
           W G++C   C  IY  C RW
Sbjct: 62  WMGRYCHRKCRNIYKSCDRW 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,812,130
Number of Sequences: 27780
Number of extensions: 154165
Number of successful extensions: 426
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)