Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_H06
(386 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 1.6
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 1.6
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 1.6
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 1.6
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 2.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 2.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 2.8
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 21 3.7
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 6.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 20 8.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 20 8.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 20 8.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 20 8.6
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 20 8.6
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 1.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 7 RDSSEDTDTRSNRDISNSF*GFRNNHSNCNIYYKCQYCDN 126
RD E ++ ++ IS+ NN++ N YK YC+N
Sbjct: 68 RDRKEREKSKEHKIISS----LSNNYNYNNNNYKKLYCNN 103
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 1.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 7 RDSSEDTDTRSNRDISNSF*GFRNNHSNCNIYYKCQYCDN 126
RD E ++ ++ IS+ NN++ N YK YC+N
Sbjct: 68 RDRKEREKSKEHKIISS----LSNNYNYNNNNYKKLYCNN 103
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 1.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 7 RDSSEDTDTRSNRDISNSF*GFRNNHSNCNIYYKCQYCDN 126
RD E ++ ++ IS+ NN++ N YK YC+N
Sbjct: 68 RDRKEREKSKEHKIISS----LSNNYNYNNNNYKKLYCNN 103
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.6 bits (46), Expect = 1.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 189 QMEDVNPPLDSWLFLFE*YMLYYS 260
Q D P L+ WL++ + Y+S
Sbjct: 297 QESDYYPDLNEWLYILSGCLYYFS 320
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 2.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 37 SNRDISNSF*GFRNNHSNCNIYYKCQYCD 123
SN ISN NN+ N +YY Y +
Sbjct: 86 SNNYISNISNYNNNNNYNKKLYYNINYIE 114
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 2.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 37 SNRDISNSF*GFRNNHSNCNIYYKCQYCD 123
SN+ I N+ NN++N +YY Y +
Sbjct: 308 SNKTIHNN--NNYNNYNNKKLYYNINYIE 334
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 2.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 37 SNRDISNSF*GFRNNHSNCNIYYKCQYCD 123
SN ISN NN+ N +YY Y +
Sbjct: 324 SNNYISNISNYNNNNNYNKKLYYNINYIE 352
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 21.4 bits (43), Expect = 3.7
Identities = 5/18 (27%), Positives = 11/18 (61%)
Frame = +1
Query: 70 FRNNHSNCNIYYKCQYCD 123
F++ H + Y C++C+
Sbjct: 25 FQDKHEQSDTLYVCEFCN 42
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 76 NNHSNCNIYYKCQYCDNN 129
N ++CNIY +NN
Sbjct: 370 NRQNSCNIYNASSRMENN 387
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 8.6
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = +1
Query: 70 FRNNHSNCNIYYKCQYCD 123
+ NN+ N +YY Y +
Sbjct: 99 YNNNNYNKKLYYNINYIE 116
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 8.6
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = +1
Query: 70 FRNNHSNCNIYYKCQYCD 123
+ NN+ N +YY Y +
Sbjct: 99 YNNNNYNKKLYYNINYIE 116
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 8.6
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = +1
Query: 70 FRNNHSNCNIYYKCQYCD 123
+ NN+ N +YY Y +
Sbjct: 99 YNNNNYNKKLYYNINYIE 116
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 8.6
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = +1
Query: 70 FRNNHSNCNIYYKCQYCD 123
+ NN+ N +YY Y +
Sbjct: 99 YNNNNYNKKLYYNINYIE 116
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 20.2 bits (40), Expect = 8.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 76 NNHSNCNIYYKCQYCDNN*KRWK 144
NN+ N N Y Y +NN +K
Sbjct: 93 NNNYNNNNYNNYNYNNNNYNNYK 115
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,498
Number of Sequences: 438
Number of extensions: 2079
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9391092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -