Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_G23
(484 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX538345-1|CAD98108.1| 1582|Homo sapiens hypothetical protein pr... 35 0.13
BX537840-1|CAD97851.1| 2150|Homo sapiens hypothetical protein pr... 31 2.1
BC040523-1|AAH40523.1| 1551|Homo sapiens CCR4-NOT transcription ... 31 2.1
BC024317-1|AAH24317.1| 1620|Homo sapiens CNOT1 protein protein. 31 2.1
AB023224-1|BAA76851.2| 1835|Homo sapiens KIAA1007 protein protein. 31 2.1
X77474-2|CAA54623.1| 254|Homo sapiens G11 protein. 30 3.7
X77474-1|CAA54622.1| 258|Homo sapiens protein ( H.sapiens G11 g... 30 3.7
X77386-1|CAA54565.1| 258|Homo sapiens G11 protein. 30 3.7
U24578-1|AAA99716.1| 170|Homo sapiens RP1 protein. 30 3.7
L26261-1|AAA20120.1| 364|Homo sapiens RP1 protein. 30 3.7
L26260-1|AAA20122.1| 364|Homo sapiens RP protein protein. 30 3.7
CR753822-3|CAM26056.1| 368|Homo sapiens serine/threonine kinase... 30 3.7
CR753822-2|CAM26057.1| 364|Homo sapiens serine/threonine kinase... 30 3.7
BX679671-2|CAM26064.1| 368|Homo sapiens serine/threonine kinase... 30 3.7
BX679671-1|CAM26065.1| 364|Homo sapiens serine/threonine kinase... 30 3.7
BC121129-1|AAI21130.1| 321|Homo sapiens STK19 protein protein. 30 3.7
BC121128-1|AAI21129.1| 321|Homo sapiens STK19 protein protein. 30 3.7
BC110347-1|AAI10348.1| 321|Homo sapiens STK19 protein protein. 30 3.7
AL844853-20|CAI41867.1| 364|Homo sapiens serine/threonine kinas... 30 3.7
AL844853-19|CAI41868.1| 368|Homo sapiens serine/threonine kinas... 30 3.7
AL662849-15|CAI17468.2| 364|Homo sapiens serine/threonine kinas... 30 3.7
AL662849-14|CAI17470.2| 368|Homo sapiens serine/threonine kinas... 30 3.7
AL645922-16|CAI41739.1| 368|Homo sapiens serine/threonine kinas... 30 3.7
AL645922-15|CAI41740.1| 364|Homo sapiens serine/threonine kinas... 30 3.7
AL049547-10|CAB89304.1| 258|Homo sapiens dJ34F7.5.2 (RP MHC cla... 30 3.7
AL049547-9|CAB89303.1| 254|Homo sapiens dJ34F7.5.1 (RP MHC clas... 30 3.7
AF019413-4|AAB67976.1| 258|Homo sapiens STK19 protein. 30 3.7
BC117265-1|AAI17266.1| 1323|Homo sapiens chromosome 11 open read... 29 6.5
AK056994-1|BAB71337.1| 500|Homo sapiens protein ( Homo sapiens ... 29 6.5
AJ430203-1|CAD22881.1| 1322|Homo sapiens EMSY protein protein. 29 6.5
AC009497-1|AAY14651.1| 2802|Homo sapiens unknown protein. 29 6.5
>BX538345-1|CAD98108.1| 1582|Homo sapiens hypothetical protein
protein.
Length = 1582
Score = 35.1 bits (77), Expect = 0.13
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 249 HVLGAAPKPFDKHTFMPSALDFYQTALRDPAFYQLYXRIVGYINAFKHYLK-PYPQEKLH 425
H+ APK FD+ T + +D + D YQ Y RI+ I A + P E LH
Sbjct: 1337 HLYAWAPKSFDESTAIKVCIDQSADSEGDYMSYQAYIRILAKIQAADPVNRFKRPDELLH 1396
Query: 426 FVGVKINDVVVEKLVT 473
+ +K+ + K VT
Sbjct: 1397 LLKLKVFPTLDHKPVT 1412
>BX537840-1|CAD97851.1| 2150|Homo sapiens hypothetical protein
protein.
Length = 2150
Score = 31.1 bits (67), Expect = 2.1
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 237 IVARHVLGAAPKPFDK--HTFMPSALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPY 407
+ R+VL A KPF + F +ALD ++ L+D Y + + + F H+L+ Y
Sbjct: 928 LALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEY 986
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 303 ALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPYPQEKLHFVGV 437
AL + ALR P ++Y + ++ FK+ LK YPQ H +
Sbjct: 929 ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASI 973
>BC040523-1|AAH40523.1| 1551|Homo sapiens CCR4-NOT transcription
complex, subunit 1 protein.
Length = 1551
Score = 31.1 bits (67), Expect = 2.1
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 237 IVARHVLGAAPKPFDK--HTFMPSALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPY 407
+ R+VL A KPF + F +ALD ++ L+D Y + + + F H+L+ Y
Sbjct: 933 LALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEY 991
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 303 ALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPYPQEKLHFVGV 437
AL + ALR P ++Y + ++ FK+ LK YPQ H +
Sbjct: 934 ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASI 978
>BC024317-1|AAH24317.1| 1620|Homo sapiens CNOT1 protein protein.
Length = 1620
Score = 31.1 bits (67), Expect = 2.1
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 237 IVARHVLGAAPKPFDK--HTFMPSALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPY 407
+ R+VL A KPF + F +ALD ++ L+D Y + + + F H+L+ Y
Sbjct: 177 LALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEY 235
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 303 ALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPYPQEKLHFVGV 437
AL + ALR P ++Y + ++ FK+ LK YPQ H +
Sbjct: 178 ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASI 222
>AB023224-1|BAA76851.2| 1835|Homo sapiens KIAA1007 protein protein.
Length = 1835
Score = 31.1 bits (67), Expect = 2.1
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 237 IVARHVLGAAPKPFDK--HTFMPSALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPY 407
+ R+VL A KPF + F +ALD ++ L+D Y + + + F H+L+ Y
Sbjct: 392 LALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEY 450
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 303 ALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPYPQEKLHFVGV 437
AL + ALR P ++Y + ++ FK+ LK YPQ H +
Sbjct: 393 ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASI 437
>X77474-2|CAA54623.1| 254|Homo sapiens G11 protein.
Length = 254
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 205 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 240
>X77474-1|CAA54622.1| 258|Homo sapiens protein ( H.sapiens G11
gene. ).
Length = 258
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 209 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 244
>X77386-1|CAA54565.1| 258|Homo sapiens G11 protein.
Length = 258
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 209 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 244
>U24578-1|AAA99716.1| 170|Homo sapiens RP1 protein.
Length = 170
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 121 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 156
>L26261-1|AAA20120.1| 364|Homo sapiens RP1 protein.
Length = 364
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 315 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 350
>L26260-1|AAA20122.1| 364|Homo sapiens RP protein protein.
Length = 364
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 315 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 350
>CR753822-3|CAM26056.1| 368|Homo sapiens serine/threonine kinase 19
protein.
Length = 368
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 319 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 354
>CR753822-2|CAM26057.1| 364|Homo sapiens serine/threonine kinase 19
protein.
Length = 364
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 315 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 350
>BX679671-2|CAM26064.1| 368|Homo sapiens serine/threonine kinase 19
protein.
Length = 368
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 319 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 354
>BX679671-1|CAM26065.1| 364|Homo sapiens serine/threonine kinase 19
protein.
Length = 364
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 315 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 350
>BC121129-1|AAI21130.1| 321|Homo sapiens STK19 protein protein.
Length = 321
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 272 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 307
>BC121128-1|AAI21129.1| 321|Homo sapiens STK19 protein protein.
Length = 321
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 272 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 307
>BC110347-1|AAI10348.1| 321|Homo sapiens STK19 protein protein.
Length = 321
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 272 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 307
>AL844853-20|CAI41867.1| 364|Homo sapiens serine/threonine kinase
19 protein.
Length = 364
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 315 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 350
>AL844853-19|CAI41868.1| 368|Homo sapiens serine/threonine kinase
19 protein.
Length = 368
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 319 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 354
>AL662849-15|CAI17468.2| 364|Homo sapiens serine/threonine kinase
19 protein.
Length = 364
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 315 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 350
>AL662849-14|CAI17470.2| 368|Homo sapiens serine/threonine kinase
19 protein.
Length = 368
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 319 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 354
>AL645922-16|CAI41739.1| 368|Homo sapiens serine/threonine kinase
19 protein.
Length = 368
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 319 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 354
>AL645922-15|CAI41740.1| 364|Homo sapiens serine/threonine kinase
19 protein.
Length = 364
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 315 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 350
>AL049547-10|CAB89304.1| 258|Homo sapiens dJ34F7.5.2 (RP MHC class
III complement protein (G11) (isoform 2)) protein.
Length = 258
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 209 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 244
>AL049547-9|CAB89303.1| 254|Homo sapiens dJ34F7.5.1 (RP MHC class
III complement protein (G11) (isoform 1)) protein.
Length = 254
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 205 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 240
>AF019413-4|AAB67976.1| 258|Homo sapiens STK19 protein.
Length = 258
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 148 RQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMC 255
R+L LSE +G+R P+ ++ L ++DL+ L C
Sbjct: 209 RELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDC 244
>BC117265-1|AAI17266.1| 1323|Homo sapiens chromosome 11 open reading
frame 30 protein.
Length = 1323
Score = 29.5 bits (63), Expect = 6.5
Identities = 30/135 (22%), Positives = 60/135 (44%)
Frame = +1
Query: 55 GSWTFLKRLSYSPYRKANSNRMARKLISTMKRQLTLSETIGKRTPICMKKKLQRIINDLM 234
GS ++K +S S + R R+ S+ + L E P+ K + ++
Sbjct: 185 GSTVYVKSVSCSD--EDEKPRKRRRTNSSSSSPVVLKEVPKAVVPV--SKTITVPVSGSP 240
Query: 235 KLSLAMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHSISYXTGLWVTLTHSSIT*SLILK 414
K+S M Q + +S PV++TFTKP +T ++ + + T S+ +++ K
Sbjct: 241 KMSNIM---QSIANSLPPHMSPVKITFTKPSTQTTNTTTQKVIIVTTSPSSTFVPNILSK 297
Query: 415 RNFISSALKSMMLSL 459
+ ++ K + S+
Sbjct: 298 SHNYAAVTKLVPTSV 312
>AK056994-1|BAB71337.1| 500|Homo sapiens protein ( Homo sapiens
cDNA FLJ32432 fis, clone SKMUS2001157, highly similar to
Homo sapiens nebulin (NEB) gene. ).
Length = 500
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/67 (23%), Positives = 36/67 (53%)
Frame = +1
Query: 166 ETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHS 345
E +GK TP+ + +++R+ ++ +S + +++ +T+TP P + K + E + S
Sbjct: 111 ENMGKGTPLAVTPEMERVKHNQENISSVLYK-ENVGKATATPVTP-EMQRVKRNQENISS 168
Query: 346 ISYXTGL 366
+ Y L
Sbjct: 169 VLYKENL 175
>AJ430203-1|CAD22881.1| 1322|Homo sapiens EMSY protein protein.
Length = 1322
Score = 29.5 bits (63), Expect = 6.5
Identities = 30/135 (22%), Positives = 60/135 (44%)
Frame = +1
Query: 55 GSWTFLKRLSYSPYRKANSNRMARKLISTMKRQLTLSETIGKRTPICMKKKLQRIINDLM 234
GS ++K +S S + R R+ S+ + L E P+ K + ++
Sbjct: 184 GSTVYVKSVSCSD--EDEKPRKRRRTNSSSSSPVVLKEVPKAVVPV--SKTITVPVSGSP 239
Query: 235 KLSLAMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHSISYXTGLWVTLTHSSIT*SLILK 414
K+S M Q + +S PV++TFTKP +T ++ + + T S+ +++ K
Sbjct: 240 KMSNIM---QSIANSLPPHMSPVKITFTKPSTQTTNTTTQKVIIVTTSPSSTFVPNILSK 296
Query: 415 RNFISSALKSMMLSL 459
+ ++ K + S+
Sbjct: 297 SHNYAAVTKLVPTSV 311
>AC009497-1|AAY14651.1| 2802|Homo sapiens unknown protein.
Length = 2802
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/67 (23%), Positives = 36/67 (53%)
Frame = +1
Query: 166 ETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHS 345
E +GK TP+ + +++R+ ++ +S + +++ +T+TP P + K + E + S
Sbjct: 2413 ENMGKGTPLAVTPEMERVKHNQENISSVLYK-ENVGKATATPVTP-EMQRVKRNQENISS 2470
Query: 346 ISYXTGL 366
+ Y L
Sbjct: 2471 VLYKENL 2477
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,415,674
Number of Sequences: 237096
Number of extensions: 1371425
Number of successful extensions: 3220
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 3033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3220
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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