Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_G19
(586 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19919| Best HMM Match : GST_N (HMM E-Value=4.7e-22) 71 9e-13
SB_11982| Best HMM Match : GST_N (HMM E-Value=7.9e-15) 63 2e-10
SB_37695| Best HMM Match : GST_N (HMM E-Value=2.4e-24) 61 7e-10
SB_28555| Best HMM Match : GST_N (HMM E-Value=3.5e-18) 56 2e-08
SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10) 36 0.018
SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.098
SB_54755| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_48679| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5) 30 1.2
SB_25424| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094) 29 2.8
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 29 3.7
SB_11883| Best HMM Match : I-set (HMM E-Value=0) 28 4.9
SB_49641| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_5046| Best HMM Match : GST_N (HMM E-Value=2.5e-05) 28 6.4
>SB_19919| Best HMM Match : GST_N (HMM E-Value=4.7e-22)
Length = 79
Score = 70.5 bits (165), Expect = 9e-13
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Frame = +2
Query: 68 MPNVVFYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK--TPFGQMPLLEIDG 241
MP+ YYF + E R++ A G EFED R++M +WP++K + PFGQ+PLL ID
Sbjct: 1 MPSYKLYYFNARGRAEPARLVFAAAGIEFEDNRMAMGEWPKVKKELHAPFGQVPLLVIDD 60
Query: 242 K-QYAQSIAISRYLGRK 289
K + AQS+AI ++ R+
Sbjct: 61 KIKLAQSLAIMTFIARE 77
>SB_11982| Best HMM Match : GST_N (HMM E-Value=7.9e-15)
Length = 221
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +2
Query: 68 MPNVVFYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKP--KTPFGQMPLLEIDG 241
MPN YF + E R+ A GG +ED R++ ++W ++K KT G +P+LE+DG
Sbjct: 1 MPNYKLIYFNTRGRAEPTRLCFAAGGIPYEDVRLTGEEWTKMKAENKTIMGYLPVLEVDG 60
Query: 242 KQYAQSIAISRYLGRKYGL 298
QY +S+AI R + GL
Sbjct: 61 IQYCESMAIFRLAAKLAGL 79
>SB_37695| Best HMM Match : GST_N (HMM E-Value=2.4e-24)
Length = 102
Score = 60.9 bits (141), Expect = 7e-10
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Frame = +2
Query: 68 MPNVVFYYFPVKALGEGPRMLLAYGGQEFEDKRI-SMDQWPEIKPK--TPFGQMPLLEID 238
MP+ +YF + E R+ A G E+EDKR ++W +KP+ PFGQ+PLL ID
Sbjct: 23 MPSYKLHYFNARGRAEPARLAFAAAGIEYEDKRFEGREEWLRVKPELDPPFGQVPLLVID 82
Query: 239 GK-QYAQSIAISRYLGRK 289
K + AQS+AI Y+ R+
Sbjct: 83 DKIKLAQSMAILAYVARE 100
>SB_28555| Best HMM Match : GST_N (HMM E-Value=3.5e-18)
Length = 195
Score = 56.4 bits (130), Expect = 2e-08
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Frame = +2
Query: 71 PNVVFYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKP--KTPFGQMPLLEI-DG 241
P YF +A E R+LL F D+R++ W +K + PFG++PLLEI DG
Sbjct: 3 PTYRVVYFDARARAECIRVLLHLADVPFTDERVAPPDWAAMKTSGRCPFGELPLLEISDG 62
Query: 242 KQYAQSIAISRYLGRKYGLAGADLEEDFEIDQNVEFLNDIRANAAAVHYEKDEAVKAKKL 421
++ AQS AI R+L +++ G D +N F K E VK +K
Sbjct: 63 RKLAQSHAIFRFLAKEH--EGGD-------SRNGAFF-------------KREHVKEQKS 100
Query: 422 AEFRETKYQFLIEKLNEILQKNGG 493
EF E +E +N++ Q+N G
Sbjct: 101 KEFHEETLPKRLEFINKLFQENKG 124
>SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10)
Length = 260
Score = 36.3 bits (80), Expect = 0.018
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Frame = +2
Query: 161 KRISMDQWPEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKYG-LAGADLEEDFEIDQ 337
+ ++ D ++ +PF +PLLE + S I RYL L G+DL + ++DQ
Sbjct: 30 EEVNHDAHTDLSGLSPFNTLPLLETKEGTFFSSNTIIRYLAASSDKLYGSDLFQRGQVDQ 89
Query: 338 NVEFLN-DIRANAAAVHYEKDEAVKAKKLAEFRETKYQFLIEKLNEILQKNGGHIALGKL 514
++ D A AAV K E R+ + ++ +N+ L H+A K
Sbjct: 90 WLDITTCDFEAAVAAVAIAK----------EGRDVEGAKIVADINKFLGFVEKHLAGRKF 139
Query: 515 TCGDS 529
GDS
Sbjct: 140 LVGDS 144
>SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1925
Score = 33.9 bits (74), Expect = 0.098
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 293 GLAGADLEEDFEIDQNVEFLNDIRANAAAVHYEKDEAVKAKKLAEFRETKYQFLIEKLNE 472
GLA ++ + + D V D H+EKDEA K + + T + L +
Sbjct: 323 GLAPSNSLDIAKCDMIVGAEEDFLTKKIQCHFEKDEAKKKELDEAIQNTHLPAFMGALTK 382
Query: 473 ILQKNG-GHIALGKLTCGD 526
IL++NG G + K+T D
Sbjct: 383 ILEENGTGFLVTDKMTYAD 401
>SB_54755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 89 YFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIK 196
YF V+A GE R+LL F ++R ++ WP +K
Sbjct: 95 YFDVRARGECIRVLLHLADVPFTEERHGLEDWPAVK 130
>SB_48679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 31.9 bits (69), Expect = 0.40
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +2
Query: 254 QSIAISRYLGRKYGLAGADLEEDFEIDQNVEFLNDIRANAAAVHYEKDEAVKAKKLAEFR 433
QS AI RY+GRKY + G EE +D L + N A ++KA A+F
Sbjct: 19 QSNAILRYIGRKYDMCGKTEEEKVIVD----ILENQEENKPAYIQSAQSSIKA--FADFL 72
Query: 434 ETKYQFLIEKLNE 472
K + LN+
Sbjct: 73 GQKSYLAGDNLNQ 85
>SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5)
Length = 547
Score = 30.3 bits (65), Expect = 1.2
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 1/121 (0%)
Frame = +3
Query: 141 AGRNSKTNAYQWTNGLKSSPRPRSVKCRCWKLTVNSTLRASPSAGTSVASTASLVQT*RK 320
A R +KT+ Q + + PR K + K ASP + T S Q R+
Sbjct: 358 ASRKTKTSKPQDQDKQAARPRQAGRKTKTSKPQAQDKQAASPRQASRKTKT-SKQQDARQ 416
Query: 321 TSRLIRTWSSLTIFVQTPPP-SITRKTRR*KPRNWQNSARPNTSSSLRN*MKYSRRTAAT 497
SR +T Q P +RKT+ KP++ + + R +S + + + R T
Sbjct: 417 ASRKTKTRKPQDQDKQAARPRQASRKTKTSKPQDARRARRARRKTSKQQDARQASRQTKT 476
Query: 498 S 500
S
Sbjct: 477 S 477
>SB_25424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +2
Query: 77 VVFYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK 202
V +YF + EG R+++ G + + + + WP +K K
Sbjct: 54 VTLHYFGSRGKAEGIRLMMEDNGVLYAETNYTKEDWPTVKQK 95
>SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)
Length = 1671
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 108 SARVRGCC*PTAGRNSKTNAYQWTNGLKSSPRPRSVKCRCWKLTVNSTLRASPSAGTS 281
++R RG C RNS ++ + + SP PR + R K + ++ S +A +S
Sbjct: 1441 ASRDRGSCLSVRDRNSYSSGHASDSSFSESPGPRQSRNRSLKRSKSAASTRSETASSS 1498
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 407 KAKKLAEFRETKYQFLIEKLNEILQKNGGHIALGKLTCGDSS 532
K K L FRE F N +L HI +G +CG +S
Sbjct: 1765 KVKVLELFREIFSDFQYSPQNPMLHVTASHIQVGPRSCGKTS 1806
>SB_11883| Best HMM Match : I-set (HMM E-Value=0)
Length = 616
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 452 LIEKLNEILQKNGGHIALGKLTCGDSSSPVCSIT 553
L+ K +EI+ GG + LGK T GDS C+ T
Sbjct: 47 LVSKGHEIVA--GGRLFLGKATLGDSGEYECTAT 78
>SB_49641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 755
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 237 TVNSTLRASPSAG-TSVASTASLVQT*RKTSRLIRTWSSLTIFVQTPPPSITRKTRR*KP 413
T T +A+PS+ TS AS + +T ++ T S+L+ F +TP P T + +P
Sbjct: 348 TPTDTTQATPSSFVTSDASINTATTATIETEAIVST-SALSAFTETPSPEQRPTTSKEEP 406
Query: 414 R 416
R
Sbjct: 407 R 407
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 311 LEEDFEIDQNVEFLNDIRANAAAVHYEKDEAVKAKKLAEFRETKYQFL--IEKLNEILQK 484
LEE E+ + +E + D++ N Y+K+ K L +++K + + +E L E+L K
Sbjct: 1221 LEEIEELKRQIEHMRDVQNN-----YQKELEAKDDSLHYLQDSKKEMMRELEDLKEMLHK 1275
Query: 485 NGGHIA 502
+A
Sbjct: 1276 KENELA 1281
>SB_5046| Best HMM Match : GST_N (HMM E-Value=2.5e-05)
Length = 280
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 107 LGEGPRMLLAYGGQEFEDKRISM 175
LG+ R+LL Y ++FEDKR ++
Sbjct: 197 LGQPIRLLLKYTNEDFEDKRYAL 219
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,267,479
Number of Sequences: 59808
Number of extensions: 351802
Number of successful extensions: 1043
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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