Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_G18
(582 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080... 111 4e-25
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 99 3e-21
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 89 2e-18
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574... 89 3e-18
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 83 2e-16
06_03_1031 - 27018871-27018916,27018987-27019110,27019251-270193... 75 3e-14
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 73 2e-13
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 65 3e-11
09_02_0288 + 6936867-6936879,6936965-6937038,6937445-6937588,693... 61 5e-10
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484... 58 5e-09
01_05_0366 + 21419270-21419312,21420372-21420458,21420625-214209... 55 5e-08
09_01_0022 + 426649-426663,427170-427420,427479-427577,428321-42... 52 4e-07
03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085 50 2e-06
11_01_0294 + 2212807-2212876,2213664-2213843,2214505-2214594,221... 48 5e-06
12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223... 48 7e-06
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 47 1e-05
02_01_0126 + 924691-924839,925103-925220,925303-925389,925482-92... 44 1e-04
01_05_0361 + 21377080-21377281,21378619-21378705,21379862-213801... 43 2e-04
09_01_0020 + 413723-413738,413867-413934,414849-415144,415275-41... 42 3e-04
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 40 0.001
02_01_0512 - 3711475-3711600,3711903-3712019,3712099-3712176,371... 35 0.054
01_05_0372 + 21541220-21541457,21541832-21541912,21542027-215420... 31 0.67
01_05_0359 + 21350580-21350829,21350990-21351064,21351156-213512... 30 1.2
05_04_0409 - 21050479-21050637,21050732-21050872,21051170-210515... 29 2.7
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 29 3.6
08_02_1283 - 25861355-25862755 28 4.7
02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202 28 6.2
01_01_0380 + 2960194-2960469 27 8.2
>01_06_1791 -
39907362-39907453,39907682-39907753,39907941-39908045,
39908212-39908302,39908787-39908849,39909448-39909497,
39909632-39909716
Length = 185
Score = 111 bits (267), Expect = 4e-25
Identities = 58/126 (46%), Positives = 76/126 (60%)
Frame = +1
Query: 73 VFVMLALVGATIADSEVTELKIDVLSVPEGCTTKSKDGDMLTMHYTGTLSDGHKFDSSFD 252
V L L + +VTEL+I V PE CT ++ GD + +HY G+L+DG FDSS+D
Sbjct: 21 VAAALILTASAKKSGDVTELQIGVKYKPESCTLQAHKGDKIKVHYRGSLTDGSVFDSSYD 80
Query: 253 RDQPFTFQLGVRPVLQRLGIRDFENMCVGEKRKLTIPSSLGYGNRGAGNVIPPHATLHFE 432
R PF F LG V++ + MCVGEKRKL IP+ +GYG RG+ IP ATL F+
Sbjct: 81 RGDPFEFTLGNGQVIKGWD-QGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIFD 139
Query: 433 VELINI 450
ELI +
Sbjct: 140 TELIAV 145
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 98.7 bits (235), Expect = 3e-21
Identities = 47/103 (45%), Positives = 64/103 (62%)
Frame = +1
Query: 154 PEGCTTKSKDGDMLTMHYTGTLSDGHKFDSSFDRDQPFTFQLGVRPVLQRLGIRDFENMC 333
PE C+ ++ GD + +HY G L+DG FDSS++R P F+LG V++ + MC
Sbjct: 139 PESCSIQAHKGDRVKVHYRGKLTDGTDFDSSYERGDPIEFELGTGQVIKGWD-QGILGMC 197
Query: 334 VGEKRKLTIPSSLGYGNRGAGNVIPPHATLHFEVELINIGDSP 462
VGEKRKL IPS LGYG +G+ IP ATL F+ EL+ + P
Sbjct: 198 VGEKRKLKIPSKLGYGAQGSPPTIPGGATLIFDTELVAVNGEP 240
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 89.0 bits (211), Expect = 2e-18
Identities = 49/128 (38%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Frame = +1
Query: 172 KSKDGDMLTMHYTGTLSDGHKFDSSFDRDQPFTFQLGVRPVLQRLGIRDFENMCVGEKRK 351
+ + GD + +HYTGTL DG KFDSS DR PF F LG V++ + M GE+
Sbjct: 64 RPESGDEVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQGEVIKGWD-EGIKTMKKGEQAV 122
Query: 352 LTIPSSLGYGNRGAGNVIPPHATLHFEVELI---NIGDSPPTTNVFKEIDADQNNMLSRE 522
T+P L YG G+ IPP+ATL F+VEL+ ++ D +FK++ A+ + + +
Sbjct: 123 FTVPPELAYGEAGSPPAIPPNATLRFDVELLSWASVKDICKDGGIFKKVLAEGHKWENPK 182
Query: 523 EVSEYLKK 546
++ E L K
Sbjct: 183 DLDEVLVK 190
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = +1
Query: 142 VLSVPEGCTTKSKDGDMLTMHYTGTLSDGHKFDSS-FDRDQPFTFQLGVRPVLQRLGIRD 318
VL EG + DG ++ + + G L DG F D D+PF F+ V++ L R
Sbjct: 288 VLKEGEGYE-RPNDGAVVRVRFIGKLEDGTVFSKKGHDGDEPFEFRTDEEQVIEGLD-RT 345
Query: 319 FENMCVGEKRKLTIPSSLGYGNRGAGN---VIPPHATLHFEVELIN 447
M GE + +P +G+ V+P ++T+ +EVEL++
Sbjct: 346 VVTMKKGEVALVRLPPQHAFGSTETKQDLAVVPANSTVWYEVELVS 391
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Frame = +1
Query: 322 ENMCVGEKRKLTIPSSLGYGNRG-----AGNVIPPHATLHFEVELIN 447
+ M GEK LT+ G+G +G A +PP+ATL+ ++EL++
Sbjct: 225 KTMKKGEKVLLTVKPQYGFGEQGKPASGAEAAVPPNATLYVDLELLS 271
>02_03_0280 -
17256524-17256733,17256838-17256958,17257318-17257445,
17257603-17257671,17257757-17257882,17257970-17258235,
17258341-17258535,17258614-17258694,17258729-17258851,
17258941-17259201,17260044-17260130,17260260-17260578
Length = 661
Score = 88.6 bits (210), Expect = 3e-18
Identities = 56/134 (41%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Frame = +1
Query: 184 GDMLTMHYTGTLSDGHKFDSSFDRDQPFTFQLGVRPVLQRLGIRDFENMCVGEKRKLTIP 363
GD + +HYTGTL DG KFDSS DRD PF F LG V++ + + M GE TIP
Sbjct: 102 GDEVQVHYTGTLLDGTKFDSSRDRDAPFKFTLGQGQVIKGWDL-GIKTMKKGENAIFTIP 160
Query: 364 SSLGYGNRGAGNVIPPHATLHFEVELI---NIGDSPPTTNVFKEIDAD---QNNMLSREE 525
L YG G+ VIPP+ATL F+VELI ++ D + K++ A+ N R+E
Sbjct: 161 PELAYGEDGSPPVIPPNATLQFDVELISWESVKDICKDGGILKKVLAEGTKWENPRDRDE 220
Query: 526 VSEYLKKQMVPSDG 567
V ++K ++ DG
Sbjct: 221 V--FVKYEVRLEDG 232
Score = 44.4 bits (100), Expect = 7e-05
Identities = 31/130 (23%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Frame = +1
Query: 172 KSKDGDMLTMHYTGTLSDGHKFDS-SFDRDQPFTFQLGVRPVLQRLGIRDFENMCVGEKR 348
+ D ++ + G L DG F + D D+PF F+ V++ L + +M GE
Sbjct: 347 RPSDCTLVRVKLIGKLEDGTIFVTRGHDGDEPFEFKTDEDQVVEGLD-KAVLSMKKGEVA 405
Query: 349 KLTIPSSLGYGN---RGAGNVIPPHATLHFEVELINIGDSPPTTNVFKEIDADQNNMLSR 519
+TIP +G+ R +V+PP++T+++EVEL++ + ++ + + + +
Sbjct: 406 LVTIPPEYAFGSDETRQDLSVVPPNSTVYYEVELVSFDKEKESWDMKENTEKIEAAAKKK 465
Query: 520 EEVSEYLKKQ 549
+E + + K +
Sbjct: 466 DEGNAWFKME 475
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = +1
Query: 322 ENMCVGEKRKLTIPSSLGYGNRGAGNV-----IPPHATLHFEVELIN 447
+ M EK LT+ G+G +G IPP+ATLH +EL++
Sbjct: 275 KTMKKNEKALLTVKPQYGFGEQGRPAARDEAAIPPNATLHINLELVS 321
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 82.6 bits (195), Expect = 2e-16
Identities = 51/123 (41%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Frame = +1
Query: 130 LKIDVLSVPEGCTTKSKDGDMLTMHYTGTLSDGHKFDSSFDRDQPFTFQLGVRPVLQRLG 309
L+ +L EG T GD + +HYTGTL DG KFDSS DR PF F+LG V++
Sbjct: 47 LRKKLLKEGEGWETPEV-GDEVEVHYTGTLLDGKKFDSSRDRGTPFKFKLGQGQVIKGWD 105
Query: 310 IRDFENMCVGEKRKLTIPSSLGYGNRGAGNVIPPHATLHFEVELI---NIGDSPPTTNVF 480
+ + M GE TIP L YG G+ IP ATL F+VEL+ ++ D +F
Sbjct: 106 L-GIKTMKKGENAVFTIPPDLAYGESGSPPTIPASATLQFDVELLSWTSVKDICQDGGIF 164
Query: 481 KEI 489
K+I
Sbjct: 165 KKI 167
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Frame = +1
Query: 172 KSKDGDMLTMHYTGTLSDGHKFDSS-FDRDQPFTFQLGVRPVLQRLGIRDFENMCVGEKR 348
+ +G ++ + TG L DG F D +PF F+ V+ + R NM GE
Sbjct: 298 RPNEGAVVKVKITGKLQDGTIFTKKGHDEPEPFEFKTDEEEVIDGID-RAVLNMKNGEVA 356
Query: 349 KLTIPSSLGYGNRGAGN---VIPPHATLHFEVELIN 447
+TIP +G+ + V+PP++T+ +EVEL++
Sbjct: 357 LVTIPPEYAFGSTESKQDLAVVPPNSTVIYEVELVS 392
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = +1
Query: 322 ENMCVGEKRKLTIPSSLGYGNRG---AGN--VIPPHATLHFEVELIN 447
+ M EK LT+ G+G G AG +PP+ATL +EL++
Sbjct: 226 KTMKKAEKVLLTVKPQYGFGENGRPAAGEEGAVPPNATLLVNLELVS 272
>06_03_1031 -
27018871-27018916,27018987-27019110,27019251-27019311,
27019466-27019558,27019663-27020016
Length = 225
Score = 75.4 bits (177), Expect = 3e-14
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 13/110 (11%)
Frame = +1
Query: 160 GCTTKSKDGDMLTMHYTGTLSDGHKFDSSFDRDQPFTFQLGVRPVLQR-----LGIRDFE 324
G ++ G ++ HYTG L DG FDSS+ R +P TF++GV V++ +G
Sbjct: 106 GTGAAAEQGQLIKAHYTGRLEDGTVFDSSYKRGKPLTFRVGVGEVIKGWDQGIVGGEGIP 165
Query: 325 NMCVGEKRKLTIPSSLGYGNRGAG--------NVIPPHATLHFEVELINI 450
M G KR L +P L YG RGAG VIPP++TL F+VE+ +
Sbjct: 166 PMLAGGKRSLRLPPELAYGARGAGCRGWEPTSCVIPPNSTLLFDVEMFRV 215
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 72.5 bits (170), Expect = 2e-13
Identities = 42/98 (42%), Positives = 62/98 (63%)
Frame = +1
Query: 154 PEGCTTKSKDGDMLTMHYTGTLSDGHKFDSSFDRDQPFTFQLGVRPVLQRLGIRDFENMC 333
P+G K+ G +++ Y G L +G FDS+ R + F F+LG+ V++ I M
Sbjct: 501 PDG--KKASPGKKVSVKYIGKLKNGTIFDSTVGR-RAFDFRLGIGEVIKGWDI-GINGMR 556
Query: 334 VGEKRKLTIPSSLGYGNRGAGNVIPPHATLHFEVELIN 447
VG+KR+LTIP S+GYGN+ G IP ++TL F+VEL+N
Sbjct: 557 VGDKRRLTIPPSMGYGNKRMG-PIPQNSTLVFDVELVN 593
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +1
Query: 88 ALVGATIADSEVTELKIDVLSVPEGCTTKSKDGDMLTMHYTGTLSDGHKFDSSFDRDQPF 267
A VG + D V + + V G + G ++ +HYT +DG FDS++ R +P
Sbjct: 98 ATVGDKLCDMNVVKSGLGYCDVEVGTGAQPPRGQLINVHYTARFTDGIVFDSTYKRGRPL 157
Query: 268 TFQLGVRPVLQRL-----GIRDFENMCVGEKRKLTIPSSLGYGNRGAG 396
T +LG +L+ L G M VG KRKL IP++L YG AG
Sbjct: 158 TMRLGAGKILRGLEQGISGGGGVPPMLVGGKRKLMIPATLAYGPEPAG 205
>09_02_0288 +
6936867-6936879,6936965-6937038,6937445-6937588,
6937754-6937958,6938552-6938852,6938952-6939150,
6939393-6939477,6939554-6939595,6939676-6939724,
6939872-6939941,6940296-6940301
Length = 395
Score = 61.3 bits (142), Expect = 5e-10
Identities = 30/92 (32%), Positives = 58/92 (63%)
Frame = +1
Query: 175 SKDGDMLTMHYTGTLSDGHKFDSSFDRDQPFTFQLGVRPVLQRLGIRDFENMCVGEKRKL 354
+ +G +++ Y GTL DG +S+ ++P+ F+LG V++ + M VG+KRKL
Sbjct: 307 ASNGSKVSIKYVGTLQDGKIVESNVG-EKPYKFKLGAGKVIRGWDV-GICGMRVGDKRKL 364
Query: 355 TIPSSLGYGNRGAGNVIPPHATLHFEVELINI 450
T+P ++ YG++ G V P ++++ +E+EL+ +
Sbjct: 365 TVPPAMCYGSKAIGEV-PKNSSIIYEIELVKV 395
>01_06_1316 +
36245368-36245507,36247229-36247315,36248334-36248439,
36249028-36249204,36249296-36249375,36249432-36249440,
36249474-36249566,36249788-36249947
Length = 283
Score = 58.0 bits (134), Expect = 5e-09
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +1
Query: 172 KSKDGDMLTMHYTGTLSD-GHKFDSSFDRDQPFTFQLGVRPVLQRLGIRDFENMCVGEKR 348
K+ + T+HY GTL++ G FD++ + + F+F++G V++ I + M VGE
Sbjct: 117 KASASTLSTVHYEGTLAENGEVFDTTHEDNSVFSFEIGEGTVIKAWDIA-VKTMKVGEVA 175
Query: 349 KLTIPSSLGYGNRGAGNVIPPH---ATLHFEVELI 444
K+T YG G+ IPP ATL FEVELI
Sbjct: 176 KITCKPEYAYGAAGSPPEIPPEVQSATLTFEVELI 210
>01_05_0366 +
21419270-21419312,21420372-21420458,21420625-21420900,
21421560-21421634,21421736-21421816,21422117-21422308,
21422756-21422772
Length = 256
Score = 54.8 bits (126), Expect = 5e-08
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +1
Query: 199 MHYTGTLSDGHKFDSSFDRDQPFTFQLGVRPVLQRLGIRDFENMCVGEKRKLTIPSSLGY 378
+H+TG L DG +F SS + D P F LG V+ + +M GEK TIPS+L
Sbjct: 15 VHFTGELVDGTQFVSSRENDIPERFILGQEDVMHGFNLA-VSSMQPGEKAIFTIPSALTM 73
Query: 379 GNRGAG----NVIPPHATLHFEVELI 444
G+ + IPP+ TL FE+ELI
Sbjct: 74 TKAGSPASIPSNIPPNQTLRFEIELI 99
>09_01_0022 +
426649-426663,427170-427420,427479-427577,428321-428473,
428893-429051,429146-429287,429460-429544,429629-429670,
429784-429832,430540-430639,431240-431287
Length = 380
Score = 51.6 bits (118), Expect = 4e-07
Identities = 32/89 (35%), Positives = 49/89 (55%)
Frame = +1
Query: 184 GDMLTMHYTGTLSDGHKFDSSFDRDQPFTFQLGVRPVLQRLGIRDFENMCVGEKRKLTIP 363
G + + Y LS+G D + + F+LG V+ + + M VG R+L IP
Sbjct: 271 GKKVYVKYVCMLSNGDTVDPTGE-SSTCKFKLGAGEVISGWDL-GIDGMRVGGIRRLGIP 328
Query: 364 SSLGYGNRGAGNVIPPHATLHFEVELINI 450
LGYG+ G GN IPP+A L+F++EL+ +
Sbjct: 329 PHLGYGDVGRGN-IPPNAWLNFDIELLKV 356
>03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085
Length = 252
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Frame = +1
Query: 178 KDGDMLTMHYTGTLSDGHKFDSSF-DRDQPFTFQLGVRPVLQRL--GIRD-FENMCVGEK 345
+ GD++ + G ++ G F +F D +P +G RP + + G+ +M G K
Sbjct: 148 RPGDLVVIDLKGRVTGGEAFVDTFGDGKRPLALVMGSRPYTRGMCEGVEYVLRSMRAGGK 207
Query: 346 RKLTIPSSLGYGNRGA--GNV---IPPHATLHFEVELINIGDSP 462
R++ +P +LG+G+ GA G+ +PP ATL + VE+ + +P
Sbjct: 208 RRVVVPPALGFGDDGADFGDAAAQVPPGATLEYVVEVDKVSIAP 251
>11_01_0294 +
2212807-2212876,2213664-2213843,2214505-2214594,
2215054-2215238,2215399-2215521,2215593-2215745,
2216090-2216416
Length = 375
Score = 48.0 bits (109), Expect = 5e-06
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Frame = +1
Query: 109 ADSEVTELKIDVLSVPEGCTTKSKDGDMLTMHYTGTLSDG-HKFDSSFDRDQPFTFQLGV 285
++ EV K+ + EG K +HY + HKF+ ++ P +G
Sbjct: 54 SNMEVLHDKVKKQVIKEGHGKKPSKFATCFLHYRAWVQGSLHKFEDTWQEQHPIELVIGK 113
Query: 286 -RPVLQRLGIRDFENMCVGEKRKLTIPSSLGYGNRGAGNV--IPPHATLHFEVELINIGD 456
+ + LGI NM GE+ L + LGYG G+ + +PP A L +EVELI D
Sbjct: 114 EKKQMSGLGI-GVGNMRSGERALLHVGWELGYGKEGSFSFPNVPPMADLLYEVELIGFDD 172
>12_01_0295 +
2235209-2235263,2236182-2236361,2236478-2236567,
2236947-2237131,2237200-2237358,2237437-2237589,
2237938-2238264
Length = 382
Score = 47.6 bits (108), Expect = 7e-06
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Frame = +1
Query: 109 ADSEVTELKIDVLSVPEGCTTKSKDGDMLTMHYTGTLS-DGHKFDSSFDRDQPFTFQLGV 285
+D EV K+ + EG K +HY + HKF+ ++ LG
Sbjct: 49 SDMEVLNDKVKKQVIKEGHGKKPSRFATCFVHYRAWVQGSSHKFEDTWQEQHSIELVLGK 108
Query: 286 -RPVLQRLGIRDFENMCVGEKRKLTIPSSLGYGNRGAGNV--IPPHATLHFEVELINIGD 456
+ + LGI NM GE+ L + LGYG G+ + +PP A L +EVELI D
Sbjct: 109 EKKEMTGLGI-GVSNMRSGERALLHVNWELGYGKEGSFSFPNVPPMADLVYEVELIGFDD 167
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 190 MLTMHYTGTLSD-GHKFDSSFDRDQPFTFQLGVRPVLQRLGIRDFENMCVGEKRKLTIPS 366
++ +HY GTL++ G FD++ + + F+F++G V++ I M VGE K+T
Sbjct: 34 LVDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIA-LRTMKVGEVAKITCKP 92
Query: 367 SLGYGNRGAGNVIPP 411
YG+ G+ IPP
Sbjct: 93 EYAYGSAGSPPEIPP 107
>02_01_0126 +
924691-924839,925103-925220,925303-925389,925482-925631,
925750-925809,925914-925976
Length = 208
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 322 ENMCVGEKRKLTIPSSLGYGNRGAGNVIPPHATLHFEVELINI 450
E M VG KR++ +P LGYG +G N IPP A ++EL+ +
Sbjct: 161 EGMKVGGKRRVIVPPELGYGKKGM-NEIPPDAPFELDIELLEV 202
>01_05_0361 +
21377080-21377281,21378619-21378705,21379862-21380134,
21380304-21380378,21380470-21380550,21380837-21381034,
21381145-21381234,21381310-21381467,21381619-21381741,
21381891-21382034,21382175-21382285,21382583-21382624,
21383043-21383261,21385319-21385627
Length = 703
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +1
Query: 199 MHYTGTLSDGHKFDSSFDRDQPFTFQLGVRPVLQRLGIRDFENMCVGEKRKLTIPSSL-G 375
+H+TG DG F S+ + P TF LG V++ + +M GEK TIP L G
Sbjct: 68 VHFTGKRLDGTWFASTREDGVPLTFILGQENVMRGFSMA-VSSMQAGEKAVFTIPPELAG 126
Query: 376 YGNRGAGNV---IPPHATLHFEVELINI 450
+R ++ I P+ L F++ELI++
Sbjct: 127 TKSRCPVDIPGNIAPNEALRFDIELISL 154
Score = 31.9 bits (69), Expect = 0.38
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 211 GTLSDGHKFDS-SFDRDQPFTFQLGVRPVLQRLGIRDFENMCVGEKRKLTIPSSLGYGNR 387
G L DG FD + D+PF F + V + L M GE TIP + +
Sbjct: 310 GKLQDGAVFDQRGHEGDEPFKFMVDEEQVSEGLE-EAVLTMREGEVSLFTIPP---HRVQ 365
Query: 388 GAGNVIPPHATLHFEVELIN-IGDSPP 465
V+P +++ +E+EL++ + D PP
Sbjct: 366 DQLLVVPVGSSVTYEIELVSVVNDKPP 392
Score = 30.7 bits (66), Expect = 0.89
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 313 RDFENMCVGEKRKLTIPSSLGYGNRGAGNV-----IPPHATLHFEVELIN 447
R E M GE+ L + G+G RG ++ +PP ATL+ ++L++
Sbjct: 221 RAVETMTEGEEAVLIVKPEYGFGERGRPSIGDEAGVPPDATLYVYLQLMS 270
>09_01_0020 +
413723-413738,413867-413934,414849-415144,415275-415400,
415484-415566,416514-416628,416755-416847,416963-417021,
417609-417684,417812-417901,418050-418202,418294-418480,
418752-418839,419077-419125,419233-419329
Length = 531
Score = 42.3 bits (95), Expect = 3e-04
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Frame = +1
Query: 118 EVTELKIDVLSVPEGCTTKSK---DGDMLTMHYTGTLSDGHKFDSSFDRDQPFTFQLGVR 288
EV + I V + EG K+K G + + Y G L +G D + D TF+LG+R
Sbjct: 428 EVLDNGIKVEHLVEG-NAKAKVASKGKQVCVRYCGRLINGEVIDPTNLDDDTHTFRLGMR 486
Query: 289 PVLQRLGIRDFENMCVGEKRKLTIPSSLGYGNRGAGNVIPPHATLHFEVELINI 450
VG KR+LTIP + GYG+ A IP ++ L +EVEL+ +
Sbjct: 487 ---------------VGGKRRLTIPPAQGYGD-VATPKIPANSWLVYEVELLEV 524
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Frame = +1
Query: 184 GDMLTMHYTGTLSDGHKFDSSFDRDQPFTFQLGVRPVLQRLGIRDFENMCVGEKRKLTIP 363
G + +Y + +G FDSS ++ QP+ F++G V++ L +M VG R+L IP
Sbjct: 164 GFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLD-EGILSMKVGGLRRLYIP 222
Query: 364 SSLGY--GNRGAGN--VIPPHATLHFEVELINI 450
L + G A + P + + F+V L+ I
Sbjct: 223 GPLAFPKGLTSAPGRPRVAPSSPVMFDVNLLYI 255
>02_01_0512 -
3711475-3711600,3711903-3712019,3712099-3712176,
3712714-3712836,3713125-3713400
Length = 239
Score = 34.7 bits (76), Expect = 0.054
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +1
Query: 136 IDVLSVPEGCTTKSKDGDMLTMHYTGTLS--DGHKFDSSFD-RDQ-----PFTFQLGVRP 291
+ L + EG DGD + +HY G L+ G +FDS++D +D+ PF F +G
Sbjct: 74 VKALDLREGPGEVPADGDQVAIHYYGRLAAKQGWRFDSTYDHKDETGDPMPFVFTVGAGN 133
Query: 292 VL 297
+L
Sbjct: 134 IL 135
>01_05_0372 +
21541220-21541457,21541832-21541912,21542027-21542092,
21543050-21543178,21544619-21544674,21545451-21545732
Length = 283
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 337 GEKRKLTIPSSLGYGNRGAG----NVIPPHATLHFEVELINI 450
GE+ TIP L G+ + IPP TL FE+ELI++
Sbjct: 4 GERAIFTIPPKLAITKSGSPASIPSSIPPEQTLRFEIELISL 45
>01_05_0359 +
21350580-21350829,21350990-21351064,21351156-21351236,
21352633-21352830,21352930-21353019,21353096-21353253,
21353350-21353472,21354989-21355096,21355530-21355826
Length = 459
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +1
Query: 325 NMCVGEKRKLTIPSSL-GYGNRGAGNV---IPPHATLHFEVELINI 450
+M GEK TIP L G +R ++ +PP+ L F+VELI++
Sbjct: 5 SMQAGEKAVFTIPPELAGTKSRCPADIPANLPPNQALQFDVELISL 50
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +1
Query: 211 GTLSDGHKFDS-SFDRDQPFTFQLGVRPVLQRLGIRDFENMCVGEKRKLTIPSSLGYGNR 387
G L DG FD D+PF F + V L M GE TIP
Sbjct: 206 GKLHDGAVFDQRGHQGDEPFEFVVDEEQVSDGLE-EAVLTMWEGEVSLFTIPPQCLQDQH 264
Query: 388 GAGNVIPPHATLHFEVELINI 450
V+PP +++ +E+EL+++
Sbjct: 265 V---VVPPGSSVTYEIELVSV 282
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 313 RDFENMCVGEKRKLTIPSSLGYGNRGAGNV-----IPPHATLHFEVELIN 447
R E M GE+ L + G+G RG ++ +PP ATL+ ++L++
Sbjct: 117 RAVETMTEGEEVVLIVKLEYGFGERGRPSIGDEAAVPPDATLYVYLQLMS 166
>05_04_0409 -
21050479-21050637,21050732-21050872,21051170-21051541,
21051699-21051701
Length = 224
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +1
Query: 340 EKRKLTIPSSLGYGNRGAGNVIPPHATLHF-------EVELINIGDSPPTTNVFKEIDA 495
E R L + + G G V+ PHA LHF E+ + +G SP TT + E +A
Sbjct: 113 ETRALQTAVAASSISSGGGVVLSPHALLHFADLGVAGELVAVLLGSSPTTTLLRLETEA 171
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +1
Query: 160 GCTTKSKDGDMLTMHYTGTLSDGHKFDSSFDRDQPFTFQLGVRPVLQRLGIRDFENMCVG 339
G KDG + HY G G + DS++ + F+ G+R +M G
Sbjct: 72 GTGNSPKDGQQVIFHYVGYNESGRRIDSTYIQG----FEEGIR------------DMKPG 115
Query: 340 EKRKLTIPSSLG 375
KR++ IP LG
Sbjct: 116 GKRRIIIPPELG 127
>08_02_1283 - 25861355-25862755
Length = 466
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -2
Query: 110 AIVAPTRANITKTQRNIMTNLRKVISDIVEHV 15
A V+P + + +++T LRK+ D +EH+
Sbjct: 432 ATVSPVETILADSSGSVLTKLRKLAGDFLEHI 463
>02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202
Length = 580
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 577 HLLDHLKEPFASSDIHSLL 521
HL DH+K P S IHSL+
Sbjct: 279 HLKDHIKRPLKSLHIHSLV 297
>01_01_0380 + 2960194-2960469
Length = 91
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/60 (21%), Positives = 31/60 (51%)
Frame = +2
Query: 101 LRSQILRLPNLRLMS*ACPKDVLRSLKMVIC*PCTTRVL*AMVISSTPVLIAISHSPFSS 280
+R++ L+ P+ + ++ + ++C PCTT+ ++V ++TP A++ S
Sbjct: 32 VRTEQLKQPHFLALLDLAVQEFGYEQRGILCIPCTTKAFRSIVGAATPTAAAVAGGEIKS 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,339,292
Number of Sequences: 37544
Number of extensions: 344468
Number of successful extensions: 940
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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