Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_G12
(560 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 177 4e-45
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 175 2e-44
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 170 7e-43
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 169 2e-42
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 164 4e-41
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 113 1e-25
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 105 3e-23
08_02_0605 + 19237482-19237644,19237957-19238246 29 3.4
07_01_1046 - 9138000-9138293,9139550-9139714,9139862-9140010,914... 29 3.4
07_03_1664 + 28478354-28478504,28478596-28478867 28 4.4
01_05_0777 + 25110356-25110662,25112569-25112789,25112880-251131... 28 4.4
12_01_0455 + 3582658-3583158,3584686-3584859,3585407-3585976 28 5.9
07_03_1038 - 23449764-23450204 27 7.7
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 177 bits (432), Expect = 4e-45
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 3/176 (1%)
Frame = +1
Query: 40 TTDKASAHWWVDQK*---SSPHQC*CSHVV*CQLEAYDPSYKVISNASCTTNCLAPLAKV 210
TT+KASAH K S+P VV ++YDP V+SNASCTTNCLAPLAKV
Sbjct: 240 TTEKASAHLKGGAKKVVISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKV 299
Query: 211 IHDNFEIIEGLMXXXXXXXXXXXXXDGPSGRLWRDGRGAQQNIVPASTGAAKAVGKVIPQ 390
+H+ F I+EGLM DGPS + WR GRGA QNI+P+STGAAKAVGKV+P+
Sbjct: 300 VHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPE 359
Query: 391 LNGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAI*TERLRSR*RSFEGHPGYTED 558
LNGKLTGMAFRVP VSVVDLT R+ K ASY+ + + + +G GYT++
Sbjct: 360 LNGKLTGMAFRVPTPNVSVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDE 415
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +3
Query: 3 GAEYVVESTGV-SHH**SFCSLVGG-PKVIISAPVLMLPCCIV 125
GAEYVVES+GV + + L GG KV+ISAP P +V
Sbjct: 227 GAEYVVESSGVFTTTEKASAHLKGGAKKVVISAPSADAPMFVV 269
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 175 bits (427), Expect = 2e-44
Identities = 95/176 (53%), Positives = 113/176 (64%), Gaps = 3/176 (1%)
Frame = +1
Query: 40 TTDKASAHWWVDQK*---SSPHQC*CSHVV*CQLEAYDPSYKVISNASCTTNCLAPLAKV 210
TT+KASAH + S+P VV + Y+PS V+SNASCTTNCLAPLAK+
Sbjct: 181 TTEKASAHLKGGARKVVISAPSADAPMFVVGVNEKNYNPSMNVVSNASCTTNCLAPLAKI 240
Query: 211 IHDNFEIIEGLMXXXXXXXXXXXXXDGPSGRLWRDGRGAQQNIVPASTGAAKAVGKVIPQ 390
+H+ F I EGLM DGPS + WR GRGA QNI+P+STGAAKAVGKV+P
Sbjct: 241 VHEEFGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPA 300
Query: 391 LNGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAI*TERLRSR*RSFEGHPGYTED 558
LNGKLTGMAFRVP VSVVDLT RL K ASYE + + S +G GYT++
Sbjct: 301 LNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKEASEGSLKGILGYTDE 356
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +3
Query: 3 GAEYVVESTGV-SHH**SFCSLVGGP-KVIISAPVLMLPCCIV 125
GAEYVVES+GV + + L GG KV+ISAP P +V
Sbjct: 168 GAEYVVESSGVFTTTEKASAHLKGGARKVVISAPSADAPMFVV 210
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 170 bits (413), Expect = 7e-43
Identities = 93/174 (53%), Positives = 108/174 (62%), Gaps = 3/174 (1%)
Frame = +1
Query: 46 DKASAHWWVDQK*---SSPHQC*CSHVV*CQLEAYDPSYKVISNASCTTNCLAPLAKVIH 216
DKA+AH K S+P + VV + Y P ++SNASCTTNCLAPLAKVI+
Sbjct: 156 DKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVIN 215
Query: 217 DNFEIIEGLMXXXXXXXXXXXXXDGPSGRLWRDGRGAQQNIVPASTGAAKAVGKVIPQLN 396
D F I+EGLM DGPS + WR GR A NI+P+STGAAKAVGKV+P LN
Sbjct: 216 DRFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALN 275
Query: 397 GKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAI*TERLRSR*RSFEGHPGYTED 558
GKLTGMAFRVP VSVVDLTVRL KPASY+ I +G GY E+
Sbjct: 276 GKLTGMAFRVPTVDVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEE 329
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +3
Query: 3 GAEYVVESTGV-SHH**SFCSLVGG-PKVIISAPVLMLPCCIV 125
GAE+VVESTGV + + L GG KV+ISAP P +V
Sbjct: 141 GAEFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVV 183
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 169 bits (410), Expect = 2e-42
Identities = 83/142 (58%), Positives = 97/142 (68%)
Frame = +1
Query: 133 EAYDPSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMXXXXXXXXXXXXXDGPSGRLWR 312
+ Y ++SNASCTTNCLAPLAKVIHDNF IIEGLM DGPS + WR
Sbjct: 163 DKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWR 222
Query: 313 DGRGAQQNIVPASTGAAKAVGKVIPQLNGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEA 492
GR A NI+P+STGAAKAVGKV+P LNGKLTGM+FRVP VSVVDLTVR+ K ASY+A
Sbjct: 223 GGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDA 282
Query: 493 I*TERLRSR*RSFEGHPGYTED 558
I + + +G GY E+
Sbjct: 283 IKSAIKSASEGKLKGIIGYVEE 304
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 3 GAEYVVESTGV-SHH**SFCSLVGG-PKVIISAP 98
GAEYVVESTGV + + L GG KV+ISAP
Sbjct: 116 GAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAP 149
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 164 bits (399), Expect = 4e-41
Identities = 82/140 (58%), Positives = 93/140 (66%)
Frame = +1
Query: 139 YDPSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMXXXXXXXXXXXXXDGPSGRLWRDG 318
Y ++SNASCTTNCLAPLAKVI+D F I+EGLM DGPS + WR G
Sbjct: 161 YKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSMKDWRGG 220
Query: 319 RGAQQNIVPASTGAAKAVGKVIPQLNGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAI* 498
R A NI+P+STGAAKAVGKV+P LNGKLTGMAFRVP VSVVDLTVRL KPASY+ I
Sbjct: 221 RAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKPASYDQIK 280
Query: 499 TERLRSR*RSFEGHPGYTED 558
+G GY E+
Sbjct: 281 AAIKEEAEGKLKGILGYVEE 300
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 113 bits (271), Expect = 1e-25
Identities = 61/129 (47%), Positives = 73/129 (56%)
Frame = +1
Query: 109 SHVV*CQLEAYDPSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMXXXXXXXXXXXXXD 288
++VV + Y P +ISNASCTTNCLAP K++ F II+G M D
Sbjct: 197 TYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTMTTTHSYTGDQRLLD 256
Query: 289 GPSGRLWRDGRGAQQNIVPASTGAAKAVGKVIPQLNGKLTGMAFRVPVAXVSVVDLTVRL 468
S R R R A NIVP STGAAKAV V+P L GKL G+A RVP VSVVDL V++
Sbjct: 257 A-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQV 315
Query: 469 GKPASYEAI 495
K E +
Sbjct: 316 SKKTLAEEV 324
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 105 bits (251), Expect = 3e-23
Identities = 55/106 (51%), Positives = 64/106 (60%)
Frame = +1
Query: 157 VISNASCTTNCLAPLAKVIHDNFEIIEGLMXXXXXXXXXXXXXDGPSGRLWRDGRGAQQN 336
+ISNASCTTNCLAP K++ + F I++G M D S R R R A N
Sbjct: 225 IISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDA-SHRDLRRARAAALN 283
Query: 337 IVPASTGAAKAVGKVIPQLNGKLTGMAFRVPVAXVSVVDLTVRLGK 474
IVP STGAAKAV V+PQL GKL G+A RVP VSVVDL + K
Sbjct: 284 IVPTSTGAAKAVALVLPQLKGKLNGIALRVPTPNVSVVDLVINTVK 329
>08_02_0605 + 19237482-19237644,19237957-19238246
Length = 150
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -3
Query: 279 LLGGSSGM--HCSHQTFNNFKVVVDDLCEGCE 190
LLGGSSG H + FN ++ V C+GCE
Sbjct: 12 LLGGSSGKTSHKKKRQFNTVELKVRMDCDGCE 43
>07_01_1046 -
9138000-9138293,9139550-9139714,9139862-9140010,
9140363-9140510,9140659-9140727,9140827-9141087,
9141498-9141692,9142932-9143048,9143701-9144477
Length = 724
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -1
Query: 134 SS*HYTTWEHQHWCGDDYFWSTHQ*AEALSVV 39
S+ HY E+Q++ G Y+WS+++ A A +++
Sbjct: 497 SAQHYIYIENQYFIGSSYYWSSNRSAGAENLI 528
>07_03_1664 + 28478354-28478504,28478596-28478867
Length = 140
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 63 LVGGPKVIISAPVLMLPCCIVSTGSLRSFLQ 155
L+GG K+++ P++ + + GSL S+LQ
Sbjct: 87 LIGGCKLVVDTPLIKCDANLPAAGSLVSYLQ 117
>01_05_0777 + 25110356-25110662,25112569-25112789,25112880-25113127,
25113274-25113664,25113751-25114155,25115260-25115366,
25115833-25116170,25116206-25116486,25116645-25116889,
25116998-25117382,25117459-25117884
Length = 1117
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 92 RTSADAPMLYSVNWKPTILPTKLFQMLPAQLTASHPSQRSS 214
R S D+P L +W P I + F +L A++ S QR S
Sbjct: 1047 RASKDSPALVPFSWGPRICVGQNFALLEAKMALSMILQRFS 1087
>12_01_0455 + 3582658-3583158,3584686-3584859,3585407-3585976
Length = 414
Score = 27.9 bits (59), Expect = 5.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 28 PVCHTTDKASAHWW 69
PVC T D HWW
Sbjct: 274 PVCSTNDNGKPHWW 287
>07_03_1038 - 23449764-23450204
Length = 146
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 289 GPSGRLWRDGRGAQQNIVPASTGAAKAVGKVIPQLNGKL 405
G R WR G+GA +V G A V P L G+L
Sbjct: 13 GQRAREWRQGKGAGGGVVFLVVGQANPVWGTPPLLCGEL 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,745,360
Number of Sequences: 37544
Number of extensions: 292854
Number of successful extensions: 791
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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