Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_G11
(528 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 36 0.014
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 33 0.096
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 33 0.096
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z81112-6|CAB03277.1| 673|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z77136-10|CAB00887.1| 673|Caenorhabditis elegans Hypothetical p... 28 4.8
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 27 8.3
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 36.3 bits (80), Expect = 0.014
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 386 IEKCAENCISTPEYNPVCGSDXK-TYKNQARLFCAQNCGVK 505
+E C+ENC +NPVC D K T+ + CA G+K
Sbjct: 442 LETCSENCHCDSFFNPVCSEDSKLTFLSPCHAGCADMPGIK 482
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 33.5 bits (73), Expect = 0.096
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 416 TPEYNPVCGSDXKTYKNQARL 478
T E+ VCGSD KTY N+ RL
Sbjct: 469 TDEFKEVCGSDGKTYSNECRL 489
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 392 KCAENCISTPEYNPVCGSDXKTYKNQARL 478
KC+E C + VCG+D KTY N+ L
Sbjct: 318 KCSEQCTMNSAH--VCGTDGKTYLNECFL 344
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 389 EKCAENCISTPEYNPVCGSDXKTYKNQARLFCAQNCGVKVTL 514
+ C N + VCGSD TY N L C +K+TL
Sbjct: 865 QSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFA-CNIKLTL 905
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 33.5 bits (73), Expect = 0.096
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 416 TPEYNPVCGSDXKTYKNQARL 478
T E+ VCGSD KTY N+ RL
Sbjct: 477 TDEFKEVCGSDGKTYSNECRL 497
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 392 KCAENCISTPEYNPVCGSDXKTYKNQARL 478
KC+E C + VCG+D KTY N+ L
Sbjct: 326 KCSEQCTMNSAH--VCGTDGKTYLNECFL 352
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 377 RQTIEKCAENCISTPEYNPVCGSDXKTYKNQARLFCAQNCGVKVTLAR 520
R + + C NC +T E++PVC ++ Y+N +F + C +++ R
Sbjct: 109 RCSSKDCNHNCTNT-EFDPVCDTNGSVYRNLC-VFQMRRCELQLESQR 154
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 389 EKCAENCISTPEYNPVCGSDXKTYKNQARLFCAQNC 496
E C C T + +P+C SD TY+N + F Q C
Sbjct: 584 EACQMPC--TDDKHPICASDFSTYENLCQ-FRKQKC 616
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 404 NCISTPEYNPVCGSDXKTYKNQARLFCAQ 490
+C PVCG+D TY N L C Q
Sbjct: 18 DCDCPSVIRPVCGTDNVTYNNLCFLRCVQ 46
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 380 QTIEKCAENCISTPEYNPVCGSDXKTYKNQARLFCAQN 493
Q ++ C + T E NP S+ YKN +R+ C N
Sbjct: 284 QCVDACETETV-TDEANPCKFSNAAKYKNGSRIICGPN 320
>Z81112-6|CAB03277.1| 673|Caenorhabditis elegans Hypothetical
protein ZC376.3 protein.
Length = 673
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +2
Query: 401 ENCISTPEYNPVCGSDX-KTYKN 466
+ + T EY P C SD KTYKN
Sbjct: 73 DGILETKEYKPACMSDAKKTYKN 95
>Z77136-10|CAB00887.1| 673|Caenorhabditis elegans Hypothetical
protein ZC376.3 protein.
Length = 673
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +2
Query: 401 ENCISTPEYNPVCGSDX-KTYKN 466
+ + T EY P C SD KTYKN
Sbjct: 73 DGILETKEYKPACMSDAKKTYKN 95
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = -1
Query: 525 ACLAKVTLTPQFWAQNSLAWFL*VLXSLPHTGLYSGVEMQFSAHFSIVCRDVPPVLG 355
A LA +T+ W +N ++W+ V L + G +E + + ++ DV + G
Sbjct: 367 AILAYITILTALWTRNKVSWWYTVAYILAYAGQSLCLETCYLSLAELMPTDVRTISG 423
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,090,418
Number of Sequences: 27780
Number of extensions: 285516
Number of successful extensions: 717
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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