Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_G08
         (277 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism...    39   2e-04
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy...    32   0.013
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc...    31   0.023
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc...    31   0.023
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc...    29   0.12 
SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9 |Schiz...    26   0.86 
SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    25   2.0  
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||...    25   2.0  
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom...    25   2.0  
SPBC1773.08c |||mannosyltransferase complex subunit |Schizosacch...    24   4.6  
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ...    23   8.0  
SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr 3...    23   8.0  
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha...    23   8.0  

>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 325

 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 28/72 (38%), Positives = 34/72 (47%)
 Frame = +3

Query: 54  LNNGMEIPAIGYGTWLGISEQAQKDSDPDKPFSFEFDGTDFPKMVEAMSYAIDVGYRHID 233
           L NG +IP+IG GTW                      G D  K   A+  A+  GYRHID
Sbjct: 17  LPNGDKIPSIGLGTWRS--------------------GKDETK--NAVCAALKAGYRHID 54

Query: 234 TAHLYRMEPEVG 269
           TAH+Y  E E+G
Sbjct: 55  TAHIYGNEKEIG 66


>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 321

 Score = 32.3 bits (70), Expect = 0.013
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 192 AMSYAIDVGYRHIDTAHLYRMEPEVG 269
           A+  A+  GYRHID A +Y  E EVG
Sbjct: 42  AVKTALQYGYRHIDAAAIYGNEDEVG 67


>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 275

 Score = 31.5 bits (68), Expect = 0.023
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = +3

Query: 48  VKLNNGMEIPAIGYGTWLGISEQAQKDSDPDKPFSFEFDGTDFPKMVEAMSYAIDVGYRH 227
           VKLNNG++ P   YG+++                       +  K  +++  A+  GYRH
Sbjct: 6   VKLNNGLKCPQFAYGSYM----------------------VNRTKCFDSVYAALQCGYRH 43

Query: 228 IDTAHLYRMEPEVG 269
           ID+A +Y  E + G
Sbjct: 44  IDSAQMYHNEADCG 57


>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 283

 Score = 31.5 bits (68), Expect = 0.023
 Identities = 25/81 (30%), Positives = 36/81 (44%)
 Frame = +3

Query: 27  AQIKIPTVKLNNGMEIPAIGYGTWLGISEQAQKDSDPDKPFSFEFDGTDFPKMVEAMSYA 206
           +Q +  TV L NGM IP IG+G ++                        + +    ++ A
Sbjct: 4   SQTESTTVTLTNGMVIPRIGFGAFM----------------------LKYNECYGLVTQA 41

Query: 207 IDVGYRHIDTAHLYRMEPEVG 269
           +D GYRHIDTA +Y  E   G
Sbjct: 42  LDSGYRHIDTAAVYGNEDICG 62


>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
           reductase AKR3C2|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 284

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 183 MVEAMSYAIDVGYRHIDTAHLYRMEPEVGM 272
           +V+++  A+  G+ HID A +Y  E EVG+
Sbjct: 33  IVDSVKNALAAGFIHIDCAEVYGNEEEVGV 62


>SPBC15D4.07c |atg9|apg9|autophagy associated protein Atg9
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 702

 Score = 26.2 bits (55), Expect = 0.86
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = -3

Query: 266 DFWFHAVEMRRIDVPVADIDRVRHGLNHLREISSIEFE 153
           +F+ HA+++   D+P     RV + L  L+ ++++  E
Sbjct: 284 EFYIHALKIATADMPTVSWQRVLYRLLKLKNVNALTAE 321


>SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 575

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 149 KWFVRITIFLCLFANSEPGSVADCWDFHPIVELDCWY 39
           K +V  +++ CLF N   GS  D  D    V   C +
Sbjct: 416 KHYVYASLYACLFCNLNEGSPKDYLDNDIYVHARCLF 452


>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 3227

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -3

Query: 188  NHLREISSIEFERKWFVRITIFLCLFANSEPGSVAD 81
            N +R+  S+     W + I +FLC ++N +     D
Sbjct: 1654 NEVRKAFSVS---NWAISILVFLCAYSNEQQTQAVD 1686


>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 419

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +3

Query: 123 KDSDPDKPFSFEFDGTDFPKMVEAMSYAIDVGY---RHIDTAHL 245
           K + PD   SF++   D P +++  S    +GY   RH++ A +
Sbjct: 279 KTTMPDDHSSFQYRLADIPGIIKGASDGKGLGYDFLRHVERAKM 322


>SPBC1773.08c |||mannosyltransferase complex subunit
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 391

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +3

Query: 138 DKPFSFEFDGTDFPKMVEAMSYAIDVGYRHIDTAH 242
           D PF     G    K  E + Y  D+GYRH D  H
Sbjct: 319 DAPFHSLAAGLFLSK--EQVHYFRDLGYRHSDIHH 351


>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1854

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 224  PVADIDRVRHGLNHLREISSIE 159
            P  D DR  H L  L EI+SIE
Sbjct: 1141 PDYDFDRFPHALLALFEIASIE 1162


>SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 555

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +3

Query: 72  IPAIGYGTW---LGISEQAQKDSDPDKPFSFEFDGTDFPKMVEAMSYAI 209
           +PA+G GTW   +  +E  Q D D +   S+++   D   +VE+ +  I
Sbjct: 388 LPAVGPGTWRFAIQGTELYQVDKDEE---SWDYPDEDASAIVESQNLDI 433


>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 4196

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 123  KDSDPDKPFSFEFDGTDFPKMVEAMSYAID 212
            +DS   K + F FD    P+ VEAM+  +D
Sbjct: 2237 RDSCYYKRYMFVFDDELSPEWVEAMNSLLD 2266


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,214,888
Number of Sequences: 5004
Number of extensions: 22258
Number of successful extensions: 83
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 61717020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)