Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_G08
(277 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 38 0.001
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 37 0.003
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 36 0.006
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 35 0.011
10_01_0065 + 845447-846187,846969-847193 34 0.019
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 34 0.019
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 33 0.025
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 33 0.033
04_01_0350 - 4610444-4610668,4612181-4612969 33 0.033
10_01_0066 + 848523-849269,849520-849741 33 0.043
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 32 0.057
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 31 0.100
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 31 0.13
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 30 0.23
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 30 0.23
07_03_0541 + 19254455-19254666,19255053-19255207,19255420-192554... 29 0.53
04_04_0930 - 29480700-29480853,29481007-29483036 28 1.2
02_03_0415 + 18805541-18805610,18805962-18806128,18806616-188066... 27 1.6
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 27 2.1
03_02_0209 + 6423962-6424159,6424360-6424569 27 2.1
01_06_0083 + 26283492-26283756,26284255-26284467,26284620-262847... 27 2.1
10_08_0687 - 19893148-19893327,19893442-19893645,19893761-198940... 27 2.8
05_06_0040 + 25116732-25118030 27 2.8
03_05_0755 - 27462388-27463140 26 3.7
03_02_0569 - 9528027-9529256,9530019-9530260,9530374-9531161,953... 26 3.7
12_01_1007 - 10208034-10208165,10208376-10208480,10208612-102086... 26 5.0
01_06_1620 + 38697960-38698131,38698532-38700732 26 5.0
01_06_1015 + 33819203-33821827 26 5.0
07_03_0472 - 18519169-18519285,18519561-18519671,18520689-185208... 25 6.5
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 25 6.5
11_06_0481 + 24092574-24093962 25 8.7
08_01_0356 + 3131214-3132443,3132584-3132778,3132892-3132972,313... 25 8.7
07_03_0354 - 17109041-17109289,17109423-17109555,17110560-171107... 25 8.7
06_03_1070 - 27351781-27351882,27352461-27352520,27353033-273531... 25 8.7
06_03_0123 - 16924074-16926089 25 8.7
06_01_0664 + 4850445-4850879,4853155-4854186 25 8.7
06_01_0551 + 3930456-3930708,3932103-3932677,3932819-3933198,393... 25 8.7
04_04_0931 - 29487072-29487914 25 8.7
03_05_0299 + 22887603-22887797,22887891-22887986,22888089-228881... 25 8.7
02_05_0502 + 29569563-29570487,29570548-29570621 25 8.7
01_06_1662 - 38974803-38974895,38975118-38975256,38976044-389761... 25 8.7
01_02_0045 - 10576475-10577198,10578347-10578504 25 8.7
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 37.9 bits (84), Expect = 0.001
Identities = 26/73 (35%), Positives = 36/73 (49%)
Frame = +3
Query: 54 LNNGMEIPAIGYGTWLGISEQAQKDSDPDKPFSFEFDGTDFPKMVEAMSYAIDVGYRHID 233
LN G +IP++G GTW SDP + +A+ A+ GYRHID
Sbjct: 7 LNTGAKIPSVGLGTW---------QSDPGV-------------VGDAVYAAVKAGYRHID 44
Query: 234 TAHLYRMEPEVGM 272
A +Y+ E EVG+
Sbjct: 45 CARMYKNENEVGI 57
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 150 SFEFDGTDFPKMV-EAMSYAIDVGYRHIDTAHLYRMEPEVG 269
SF D P V +A+ AID GYRH DTA Y E +G
Sbjct: 36 SFPLDAPQLPATVRDAVLRAIDAGYRHFDTAAAYGTEAPLG 76
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 35.5 bits (78), Expect = 0.006
Identities = 26/73 (35%), Positives = 33/73 (45%)
Frame = +3
Query: 54 LNNGMEIPAIGYGTWLGISEQAQKDSDPDKPFSFEFDGTDFPKMVEAMSYAIDVGYRHID 233
LN G +IP++G GTW SDP + A+ A+ GYRHID
Sbjct: 7 LNTGAKIPSVGLGTW---------QSDPGV-------------VGNAVYAAVKAGYRHID 44
Query: 234 TAHLYRMEPEVGM 272
A Y E EVG+
Sbjct: 45 CASAYNNEKEVGL 57
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 34.7 bits (76), Expect = 0.011
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 150 SFEFDGTDFPKMVEAMSYAIDVGYRHIDTAHLYRMEPEVG 269
SF TD + + + AI+ GYRH DTA +Y+ E +G
Sbjct: 21 SFPLGATDPSTVKDVVLRAIEAGYRHFDTAAVYQTEAILG 60
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 33.9 bits (74), Expect = 0.019
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 159 FDGTDFPKMVEAMSYAIDVGYRHIDTAHLYRMEPEVG 269
F T AM AI++GYRH DTA +Y E VG
Sbjct: 26 FPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVG 62
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 33.9 bits (74), Expect = 0.019
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 192 AMSYAIDVGYRHIDTAHLYRMEPEVG 269
A+ A++VGYRHIDTA +Y E VG
Sbjct: 49 ALLAALEVGYRHIDTASVYGSERVVG 74
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 33.5 bits (73), Expect = 0.025
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 183 MVEAMSYAIDVGYRHIDTAHLYRMEPEV 266
+ + +S A+ GYRHID A LY+ E EV
Sbjct: 28 VADVVSAAVKAGYRHIDCAPLYKNEQEV 55
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 33.1 bits (72), Expect = 0.033
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 189 EAMSYAIDVGYRHIDTAHLYRMEPEVG 269
+A+ A++ G+RH DTA LYR E +G
Sbjct: 37 DAVLAALEAGFRHFDTASLYRTEAPLG 63
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 33.1 bits (72), Expect = 0.033
Identities = 25/81 (30%), Positives = 38/81 (46%)
Frame = +3
Query: 27 AQIKIPTVKLNNGMEIPAIGYGTWLGISEQAQKDSDPDKPFSFEFDGTDFPKMVEAMSYA 206
A +P V LN+G +P +G+GT G S T + +++A
Sbjct: 16 AATAVPCVTLNSGHAMPVLGFGT--GSS-------------------TPPADLAATIAHA 54
Query: 207 IDVGYRHIDTAHLYRMEPEVG 269
+ +GYRH+DTA +Y E VG
Sbjct: 55 VRLGYRHLDTAAVYGTEGAVG 75
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 32.7 bits (71), Expect = 0.043
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 159 FDGTDFPKMVEAMSYAIDVGYRHIDTAHLYRME 257
F T + A+ AI++GYRH DTA LY E
Sbjct: 28 FPFTSSEETTAALLRAIELGYRHFDTARLYATE 60
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 32.3 bits (70), Expect = 0.057
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 54 LNNGMEIPAIGYGTWLGISEQAQKDSDPDKPFSFEFDGTDFPKMV-EAMSYAIDVGYRHI 230
LN G +IP++G GTW QA+ P +V A+ A+ GYRHI
Sbjct: 7 LNTGAKIPSVGLGTW-----QAE------------------PGVVGNAVYAAVKAGYRHI 43
Query: 231 DTAHLYRMEPEVGM 272
D A Y E E+G+
Sbjct: 44 DCAQAYFNEKEIGV 57
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 31.5 bits (68), Expect = 0.100
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 171 DFPKMVEAMSYAIDVGYRHIDTAHLYRMEPEVG 269
D P + + + A+ +GYRH D A Y+ E EVG
Sbjct: 32 DSPAIRDLIHSALRIGYRHFDCAADYQNEAEVG 64
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 31.1 bits (67), Expect = 0.13
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 207 IDVGYRHIDTAHLYRMEPEVG 269
+ GYRH+DTA Y +E EVG
Sbjct: 89 LQAGYRHVDTAAQYGIEQEVG 109
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 54 LNNGMEIPAIGYGTWLGISEQA 119
L +G IPA+G GTW S+ A
Sbjct: 16 LKSGHAIPAVGLGTWRAGSDTA 37
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 30.3 bits (65), Expect = 0.23
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 204 AIDVGYRHIDTAHLYRMEPEVG 269
A++VG+RH DTA LY E +G
Sbjct: 42 ALEVGFRHFDTAALYGTEAPLG 63
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 30.3 bits (65), Expect = 0.23
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 192 AMSYAIDVGYRHIDTAHLYRMEPEVG 269
A+ AI+ GYRH DTA Y E +G
Sbjct: 35 AVLKAIEAGYRHFDTAAHYETEAPIG 60
>07_03_0541 +
19254455-19254666,19255053-19255207,19255420-19255496,
19255572-19255679
Length = 183
Score = 29.1 bits (62), Expect = 0.53
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 251 AVEMRRIDVPVADIDRVRHGLNHLREISSIEFERKWF 141
AV+++++ A+I +RH HLR S IE E+K +
Sbjct: 47 AVDLQQVAALKAEIQEIRHETQHLR--SGIEVEKKGY 81
>04_04_0930 - 29480700-29480853,29481007-29483036
Length = 727
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 54 LNNGMEIPAIGYGTWLGISEQAQKDSDP-DKPFSFEFD 164
L N E+P G WLGI + D DP ++ + EFD
Sbjct: 115 LTNNPELPTDSSGQWLGICNN-RTDGDPKNRIVAVEFD 151
>02_03_0415 +
18805541-18805610,18805962-18806128,18806616-18806645,
18807459-18807515,18808268-18808337,18808915-18810998
Length = 825
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 258 VPCGRDAPYRCAGSRHRSRTTWPQPSSGNQ 169
VP RD R +H R + P P +GNQ
Sbjct: 363 VPSSRDKRSRSGRGKHNIRFSQPLPDTGNQ 392
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 49 SSSTMGWKSQQSATEPGSELANRHKKIVIRTNHFRSNSMELISRRWLRP 195
SSS W++ + P SE +R K + N R E +R +L P
Sbjct: 167 SSSAWDWENFYPPSPPDSEFFDRRKADLEEANRLRELEEEEKARGYLHP 215
>03_02_0209 + 6423962-6424159,6424360-6424569
Length = 135
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 169 LISRRWLRPCRTRSMSATGTSIRRISTAWNQK 264
L+ RW +PC+ G +I R S W ++
Sbjct: 98 LMGNRWRKPCQAMGWHDDGDAIWRRSPPWRRR 129
>01_06_0083 +
26283492-26283756,26284255-26284467,26284620-26284771,
26284884-26285157,26285277-26285485
Length = 370
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -2
Query: 264 LLVPCGRDAPYRCAGSRHRSRTTWPQPSS 178
LL CG PY + R+ T W P S
Sbjct: 307 LLACCGGHGPYHTGATCDRTATVWGDPGS 335
>10_08_0687 -
19893148-19893327,19893442-19893645,19893761-19894096,
19894185-19894472,19894561-19894776,19896414-19896737
Length = 515
Score = 26.6 bits (56), Expect = 2.8
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -2
Query: 270 YRLLVPCGRDAPYRC--AGSRHRSRTTWPQPSSGNQFH 163
+RLLVP GR+ Y C A H RT + G+ H
Sbjct: 76 FRLLVPAGREQIYTCDPAVVEHILRTNFANYGKGSFNH 113
>05_06_0040 + 25116732-25118030
Length = 432
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = -2
Query: 258 VPCGRDAPYRCAGSRHRSRTTWPQPSSGNQFHRIRTKMVCPDHY 127
VPCG ++ Y+C + T+ P PS K +C +
Sbjct: 51 VPCGTNSSYQCLECGNEHSTSKPIPSFSPSQSSSNMKELCGSRF 94
>03_05_0755 - 27462388-27463140
Length = 250
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 157 NSMELISRRWLRPCRTRSMSATGTSIRRISTA 252
++ EL R RPC SA S+RR+ +A
Sbjct: 130 SAQELAGRLARRPCPPAGRSAAAPSVRRVHSA 161
>03_02_0569 -
9528027-9529256,9530019-9530260,9530374-9531161,
9531613-9531953,9532090-9532310,9532392-9532702,
9532779-9533038,9533691-9533891,9533992-9534167,
9534242-9534296,9535739-9536146
Length = 1410
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 21 IMAQIKIPTVKLNNG--MEIPAIGYGTWLGISEQAQKDSDPDKPFS 152
++A ++P++K + M++P + I Q+ K+S+PD P S
Sbjct: 734 LVATERVPSIKRQDSFEMKLPDLPKVDIHPIQRQSSKNSEPDSPIS 779
>12_01_1007 -
10208034-10208165,10208376-10208480,10208612-10208673,
10210820-10211456
Length = 311
Score = 25.8 bits (54), Expect = 5.0
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = -1
Query: 112 SLIPSQVP*PIAGISIPLLSLTVGILI 32
+L+P VP P+A I + ++L++ + +
Sbjct: 230 TLVPGSVPRPVARIGVTFVALSIALFL 256
>01_06_1620 + 38697960-38698131,38698532-38700732
Length = 790
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 93 TWLGISEQAQKDSDPDKPFSFEFDGTD 173
T+ G+ E + +SDP+ ++F+F D
Sbjct: 227 TYTGVPELSPTNSDPNSAYTFQFVDND 253
>01_06_1015 + 33819203-33821827
Length = 874
Score = 25.8 bits (54), Expect = 5.0
Identities = 15/79 (18%), Positives = 30/79 (37%)
Frame = +1
Query: 37 KYQQSSSTMGWKSQQSATEPGSELANRHKKIVIRTNHFRSNSMELISRRWLRPCRTRSMS 216
K+ + + T S+ +EL + + R++ SME + W+ C
Sbjct: 634 KFLEINGTFDVPSETEGILGHAELVSLKRLATTRSSDLNITSMEAVRELWIENCSQLESL 693
Query: 217 ATGTSIRRISTAWNQKSVW 273
+ I +S N ++W
Sbjct: 694 LSVDEIEILSAWGNLHNLW 712
>07_03_0472 -
18519169-18519285,18519561-18519671,18520689-18520816,
18520965-18521147,18521337-18521427
Length = 209
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 276 RPYRLLVPCGRDAPYRCAGSRHRSRTTW 193
RP R+L+ CG AP+R R W
Sbjct: 10 RPARVLLLCGARAPHRPESENDRFEGGW 37
>01_06_1556 -
38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 261 LVPCGRDAPYRCAGSRHRSRTTWPQPSSGNQ 169
L PC R RC +R RS+ T + G +
Sbjct: 126 LAPCRRSKRLRCKPTRKRSKPTGKRDLGGKE 156
>11_06_0481 + 24092574-24093962
Length = 462
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 111 EQAQKDSDPDKPFSFEFDGTDFPKMVEAMSYAID 212
+ QK DP F ++ D DF + A+ A+D
Sbjct: 325 QNTQKKPDPKVNFEWDLDNDDFISIDGAVEGAVD 358
>08_01_0356 +
3131214-3132443,3132584-3132778,3132892-3132972,
3133324-3133383,3133466-3133560,3133660-3133816,
3133896-3134021,3134398-3134478,3134557-3134647,
3134735-3134868,3135068-3135136,3135219-3135308,
3135405-3135508,3135594-3135762,3136066-3136134
Length = 916
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 57 NNGMEIPAIGYGTWLGISEQAQKDSDPDKPFSFEFDGTDFP 179
+ ++ PA+G GT DSD DKP S + + T P
Sbjct: 133 DRNLKKPAVGSGT--------ANDSDDDKPLSLKINSTKTP 165
>07_03_0354 -
17109041-17109289,17109423-17109555,17110560-17110738,
17111568-17111689,17111813-17111960
Length = 276
Score = 25.0 bits (52), Expect = 8.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -3
Query: 242 MRRIDVPVADIDRVRHGLNHLREISSIEFERKWFVRITIFLCLFANSEPGSVAD 81
M R+ PV IDR +G R + + ++ KW L AN +PG V D
Sbjct: 203 MTRVYGPVWSIDRAPNGPLQFRAVVTGGYDGKWVWADREVLP--ANWQPGQVYD 254
>06_03_1070 -
27351781-27351882,27352461-27352520,27353033-27353142,
27353583-27353693,27353781-27353939,27354035-27354158,
27354755-27354812,27356656-27356933
Length = 333
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = -2
Query: 249 GRDAPYRCAGSRHRSRTTWPQPSSGNQFHRIRTKMVCPD 133
G A C+ S TTWP + Q + +R PD
Sbjct: 209 GAVATNNCSSSIESPSTTWPTSEAVEQENMLRPLRAMPD 247
>06_03_0123 - 16924074-16926089
Length = 671
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 168 FHRIRTKMVCPDHYLFV 118
F ++ +MVCPD Y FV
Sbjct: 499 FDMMQEEMVCPDDYTFV 515
>06_01_0664 + 4850445-4850879,4853155-4854186
Length = 488
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 197 HGLNHLREISSIEFERKWFVRITIFLCLFANSEPGSV 87
H +H R ++ + R WF+R C NS GSV
Sbjct: 298 HTDSHTRSLTHLMLWRVWFLRNDAVHCHGKNSVCGSV 334
>06_01_0551 +
3930456-3930708,3932103-3932677,3932819-3933198,
3933301-3933387,3933473-3933803,3933936-3934346,
3934430-3934489,3934586-3934792
Length = 767
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 76 GISIPLLSLTVGILICAIIT 17
G+ PLL +VGI++C I T
Sbjct: 324 GMCYPLLVSSVGIIVCLITT 343
>04_04_0931 - 29487072-29487914
Length = 280
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 54 LNNGMEIPAIGYGTWLGISEQAQKDSDPDKPFSFEFD 164
L + + P G WLGI+ + S ++ + EFD
Sbjct: 117 LTSNLSSPRGSSGQWLGIANEQTDGSPANRIVAVEFD 153
>03_05_0299 +
22887603-22887797,22887891-22887986,22888089-22888172,
22888573-22888733,22889458-22889575,22889914-22890049,
22890351-22890529,22890690-22890929
Length = 402
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 189 EAMSYAIDVGYRHIDTAHLYRMEP 260
+ +SY+ D G +DTA +Y + P
Sbjct: 79 DILSYSFDQGVNILDTAEMYPVPP 102
>02_05_0502 + 29569563-29570487,29570548-29570621
Length = 332
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 173 FPEDG*GHVVRDRCRLPAHRYGASL 247
FPE G + DRCR + R+G S+
Sbjct: 65 FPEGILGGELMDRCRAQSLRFGTSI 89
>01_06_1662 -
38974803-38974895,38975118-38975256,38976044-38976117,
38976197-38976308,38976418-38976479,38976996-38977337
Length = 273
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 111 EQAQKDSDPDKPFSFEFDGTDFPKMVEA 194
EQA K+ P FEF TD K V+A
Sbjct: 71 EQATKNGKPVLYLVFEFLDTDLKKFVDA 98
>01_02_0045 - 10576475-10577198,10578347-10578504
Length = 293
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -2
Query: 249 GRDAPYRCAGSRHRSRTT--WPQPSSGNQFHR 160
G A R AG R + +T WP+PS G + R
Sbjct: 176 GSAAAARGAGPREQGGSTASWPRPSLGTRIRR 207
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,091,981
Number of Sequences: 37544
Number of extensions: 151590
Number of successful extensions: 549
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 268461864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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