Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_G08
(277 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 0.70
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 2.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 2.1
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 3.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 3.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 4.9
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 6.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 6.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 6.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 6.5
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 20 6.5
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.0 bits (47), Expect = 0.70
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 188 NHLREISSIEFERKWFVRITIFL 120
N L ++S I+ WF+ TIFL
Sbjct: 283 NSLPKVSYIKASEIWFLGCTIFL 305
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 2.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 64 PLLSLTVGILICAIITF 14
PL+SL G+ IC ++TF
Sbjct: 273 PLISLYYGVSIC-LVTF 288
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 2.1
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -2
Query: 249 GRDAPYRCAGSRHRSRTTWPQPSSGNQFHRI 157
G+D P R H TT+P+ + N ++
Sbjct: 1456 GKDYPLRLGPCWHAVMTTYPRINPDNHNEKL 1486
Score = 21.0 bits (42), Expect = 2.8
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +3
Query: 138 DKPFSFEFDGTDFPKMVEAMSYAIDVGYRHID 233
DK + FDG D+P + +A+ Y I+
Sbjct: 1447 DKTRAQTFDGKDYPLRLGPCWHAVMTTYPRIN 1478
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 20.6 bits (41), Expect = 3.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 225 AGSRHRSRTTWPQP 184
AGS+H + TW P
Sbjct: 334 AGSKHLLQNTWLDP 347
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.6 bits (41), Expect = 3.7
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 188 NHLREISSIEFER 150
N +RE+ EFER
Sbjct: 852 NRIRELKGFEFER 864
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.2 bits (40), Expect = 4.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 52 LTVGILICAIITF 14
L GIL+C ++TF
Sbjct: 698 LLSGILLCYLVTF 710
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 19.8 bits (39), Expect = 6.5
Identities = 6/33 (18%), Positives = 16/33 (48%)
Frame = +1
Query: 34 LKYQQSSSTMGWKSQQSATEPGSELANRHKKIV 132
+ Y+Q++ T WK+ + L + + ++
Sbjct: 207 ISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLI 239
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.8 bits (39), Expect = 6.5
Identities = 6/33 (18%), Positives = 16/33 (48%)
Frame = +1
Query: 34 LKYQQSSSTMGWKSQQSATEPGSELANRHKKIV 132
+ Y+Q++ T WK+ + L + + ++
Sbjct: 207 ISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLI 239
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 19.8 bits (39), Expect = 6.5
Identities = 6/33 (18%), Positives = 16/33 (48%)
Frame = +1
Query: 34 LKYQQSSSTMGWKSQQSATEPGSELANRHKKIV 132
+ Y+Q++ T WK+ + L + + ++
Sbjct: 258 ISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLI 290
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 19.8 bits (39), Expect = 6.5
Identities = 6/33 (18%), Positives = 16/33 (48%)
Frame = +1
Query: 34 LKYQQSSSTMGWKSQQSATEPGSELANRHKKIV 132
+ Y+Q++ T WK+ + L + + ++
Sbjct: 207 ISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLI 239
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 19.8 bits (39), Expect = 6.5
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -3
Query: 119 CLFANSEPG 93
C+F SEPG
Sbjct: 70 CIFVTSEPG 78
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,560
Number of Sequences: 438
Number of extensions: 1715
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5388717
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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