Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_G06
         (103 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    31   0.082
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    31   0.082
AJ505020-1|CAD43602.1|  382|Caenorhabditis elegans alpha-1->3-fu...    25   5.4  
AC006674-5|AAF39933.2|  382|Caenorhabditis elegans Fucosyl trans...    25   5.4  
Z98866-11|CAB11564.2|  335|Caenorhabditis elegans Hypothetical p...    25   9.5  
U62896-1|AAB17868.1|  335|Caenorhabditis elegans PIE-1 protein.        25   9.5  
U41278-4|AAK31513.3|  928|Caenorhabditis elegans Hypothetical pr...    25   9.5  

>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 31.5 bits (68), Expect = 0.082
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 4   WANEKTRGHIKSPISDDTIDPNAAAALFNVIFF 102
           + +E T+GHIK  I+ D+I     A L N  +F
Sbjct: 141 FVSENTKGHIKKIINPDSISEELVAVLTNAFYF 173


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 31.5 bits (68), Expect = 0.082
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 4   WANEKTRGHIKSPISDDTIDPNAAAALFNVIFF 102
           + +E T+GHIK  I+ D+I     A L N  +F
Sbjct: 141 FVSENTKGHIKKIINPDSISEELVAVLTNAFYF 173


>AJ505020-1|CAD43602.1|  382|Caenorhabditis elegans
           alpha-1->3-fucosyltransferase homologueprotein.
          Length = 382

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 101 KNITLKSAAAAFGSMVSSEIGDLICPRV 18
           KN+T+  A   +G  + +E+  L CP +
Sbjct: 52  KNVTIYVATTYYGDPIDAEMAFLTCPEL 79


>AC006674-5|AAF39933.2|  382|Caenorhabditis elegans Fucosyl
           transferase protein 4 protein.
          Length = 382

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 101 KNITLKSAAAAFGSMVSSEIGDLICPRV 18
           KN+T+  A   +G  + +E+  L CP +
Sbjct: 52  KNVTIYVATTYYGDPIDAEMAFLTCPEL 79


>Z98866-11|CAB11564.2|  335|Caenorhabditis elegans Hypothetical
           protein Y49E10.14 protein.
          Length = 335

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 40  PISDDTIDPNAAAALFNV 93
           P+ D TIDPNA    F V
Sbjct: 303 PMMDVTIDPNATGGAFEV 320


>U62896-1|AAB17868.1|  335|Caenorhabditis elegans PIE-1 protein.
          Length = 335

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 40  PISDDTIDPNAAAALFNV 93
           P+ D TIDPNA    F V
Sbjct: 303 PMMDVTIDPNATGGAFEV 320


>U41278-4|AAK31513.3|  928|Caenorhabditis elegans Hypothetical
           protein F33G12.5 protein.
          Length = 928

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 82  ARQLHSDLWCHQRLE 38
           +R+LH DLW  + LE
Sbjct: 695 SRELHEDLWARKELE 709


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,256,353
Number of Sequences: 27780
Number of extensions: 19468
Number of successful extensions: 46
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 12,740,198
effective HSP length: 15
effective length of database: 12,323,498
effective search space used: 221822964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)