Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_F24
         (542 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0QI42 Cluster: ABC transporter ATP-binding protein; n=...    36   0.60 
UniRef50_Q9VQ37 Cluster: CG18317-PA; n=5; Endopterygota|Rep: CG1...    35   1.4  
UniRef50_Q5CYU1 Cluster: Very large low complexity protein; n=3;...    33   4.3  
UniRef50_A1ARU8 Cluster: Glycosyl transferase, group 1; n=2; Des...    33   5.6  
UniRef50_A3TMJ7 Cluster: Lipopolysaccharide biosynthesis protein...    32   9.8  
UniRef50_Q7RYE3 Cluster: Predicted protein; n=1; Neurospora cras...    32   9.8  

>UniRef50_A0QI42 Cluster: ABC transporter ATP-binding protein; n=2;
           Mycobacterium avium|Rep: ABC transporter ATP-binding
           protein - Mycobacterium avium (strain 104)
          Length = 245

 Score = 35.9 bits (79), Expect = 0.60
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
 Frame = +3

Query: 33  GNRTVVTSVGGIRRVTVVARCGQIITRPDSSRILRAVVGVATAVGDRATIARVATLVLET 212
           G   V+T   G  + TV+     ++T PD  R+L   V V    GDRA + +   L+   
Sbjct: 31  GEILVLTGPSGCGKSTVLRALAGLLT-PDGGRVLADGVPVTGTSGDRAMVFQDNALLPWR 89

Query: 213 TVVSNILSQVALNSS-*AGRQAGDRVIVKEIRL 308
           TV SNI   + L     AGR+A     + E+ L
Sbjct: 90  TVRSNIELALRLRGQPRAGRRAAAERWISELGL 122


>UniRef50_Q9VQ37 Cluster: CG18317-PA; n=5; Endopterygota|Rep:
           CG18317-PA - Drosophila melanogaster (Fruit fly)
          Length = 365

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +3

Query: 9   RVMETRTHGNRTVVTSVGGIRRVTVVARCGQIITRPDSSRILRAVVGVATAVGDRA 176
           R + T    NR+    +GG+RR+  ++ CG   T P S  I++ +  +    G RA
Sbjct: 71  RKLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRA 126


>UniRef50_Q5CYU1 Cluster: Very large low complexity protein; n=3;
            cellular organisms|Rep: Very large low complexity protein
            - Cryptosporidium parvum Iowa II
          Length = 5832

 Score = 33.1 bits (72), Expect = 4.3
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 199  WFWKQPSFLISCLKLRLIHPRQA 267
            W WK PS L+S L+L +++PR A
Sbjct: 2911 WDWKSPSILVSILRLLILNPRLA 2933


>UniRef50_A1ARU8 Cluster: Glycosyl transferase, group 1; n=2;
           Desulfuromonadales|Rep: Glycosyl transferase, group 1 -
           Pelobacter propionicus (strain DSM 2379)
          Length = 385

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
 Frame = +3

Query: 3   TIRVMETRTHGNRTVVTSVGGIRRVTVVARCGQIITRPD----SSRILRAVVGVAT--AV 164
           ++ ++E    G   VVT VGG R V V    G ++   D     +R++R +   ++  AV
Sbjct: 295 SVTLLEAMASGVPAVVTDVGGNREVVVEGETGFMVAVDDDGAMGARVVRMLADTSSSPAV 354

Query: 165 GDRATIARVATLVLETTVVSN 227
           GDRA   RVA       +++N
Sbjct: 355 GDRAR-ERVAAAFSVAGMMNN 374


>UniRef50_A3TMJ7 Cluster: Lipopolysaccharide biosynthesis protein;
           n=1; Janibacter sp. HTCC2649|Rep: Lipopolysaccharide
           biosynthesis protein - Janibacter sp. HTCC2649
          Length = 383

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
 Frame = +3

Query: 6   IRVMETRTHGNRTVVTSVGGIRRVTVVARCGQIITRPDSSRILRAVVGVATAVGDR---- 173
           + VME    G   V T VGG+ +       G ++T  DS  +  A+V VA A   R    
Sbjct: 291 VAVMEAFAAGLPIVATDVGGLPQQVTAGVEGLLVTPGDSKALADALVSVARADAMRQRMG 350

Query: 174 -ATIARVA 194
            A +ARVA
Sbjct: 351 AAALARVA 358


>UniRef50_Q7RYE3 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 717

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 95  ASGHHRNPPDTPHRSYHRPVPMSSGLHN 12
           A+  H +PP +P RS+H  +P S   H+
Sbjct: 368 AASRHSSPPQSPTRSHHSQIPSSPNRHS 395


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,384,416
Number of Sequences: 1657284
Number of extensions: 7428426
Number of successful extensions: 17426
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17394
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)