Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_F24
         (542 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93379-3|CAB07590.1|  282|Caenorhabditis elegans Hypothetical pr...    31   0.71 
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    29   2.9  
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ...    29   2.9  
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ...    28   3.8  
AF016444-12|AAB65927.2|  295|Caenorhabditis elegans Serpentine r...    27   6.6  
L10986-13|AAL08033.1|  140|Caenorhabditis elegans Hypothetical p...    27   8.7  
AF067949-2|AAC19235.1|  357|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z93379-3|CAB07590.1|  282|Caenorhabditis elegans Hypothetical
           protein F21H7.4 protein.
          Length = 282

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -1

Query: 89  GHHRNPPDTPHRSYHRPVPMSSGLHNPDC 3
           GHHR PP  PHR  HRP         P+C
Sbjct: 75  GHHR-PPHRPHRPPHRPHRPPRPPPRPEC 102


>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
            protein.
          Length = 1492

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -1

Query: 95   ASGHHRNPPDTPHRSYHRPVP 33
            AS H   PP  PH SY  P P
Sbjct: 1223 ASSHAPTPPPQPHPSYQAPAP 1243


>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
            protein Y53H1C.2a protein.
          Length = 1512

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -1

Query: 95   ASGHHRNPPDTPHRSYHRPVP 33
            AS H   PP  PH SY  P P
Sbjct: 1243 ASSHAPTPPPQPHPSYQAPAP 1263


>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
           protein Y47D3B.7 protein.
          Length = 1113

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 92  SGHHRNPPDTPHRSYHRPVP 33
           S HH++PP  PH  +H P+P
Sbjct: 221 SQHHQSPP--PHHHHHHPMP 238


>AF016444-12|AAB65927.2|  295|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 6 protein.
          Length = 295

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 404 VHWKVNYIVVISRALNKLFCLFKYSV*HYFITVFTFLS 517
           VHWKVN++ ++  A N   C F  +    +I  F F S
Sbjct: 215 VHWKVNHLAMVD-AANVFLCNFFPTSISNYIAQFPFSS 251


>L10986-13|AAL08033.1|  140|Caenorhabditis elegans Hypothetical
           protein F10E9.12 protein.
          Length = 140

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 496 DKVVLNGILKKTKQFI*CPANNHYIVYLPM 407
           DK+ L  +L+K+K+F   P     I YLP+
Sbjct: 52  DKLPLEAVLQKSKEFDEIPTTPDNIPYLPL 81


>AF067949-2|AAC19235.1|  357|Caenorhabditis elegans Hypothetical
           protein T10H9.1 protein.
          Length = 357

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 413 KVNYIVVISRALNKLFCLFKYSV*HYFITVFTFLSVCVC 529
           KV +I+ +S A  ++F LF+ S   YF      +S+ +C
Sbjct: 105 KVRHIITLSIAAERIFALFRPS--EYFFLDHKMISLKIC 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,354,400
Number of Sequences: 27780
Number of extensions: 177553
Number of successful extensions: 372
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)