Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_F24
         (542 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.22 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   3.5  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   3.5  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   3.5  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 290 YYSIACLPACLG*IKRNLRQDIRNDGCFQNQCC 192
           +Y +     C G  +R+++Q I+   C +NQ C
Sbjct: 78  HYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQC 110


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 86  HHRNPPDTPHRSYHRPVPMSS 24
           HH +   TPH  +  P+  SS
Sbjct: 432 HHHSHAATPHHQHSTPLAHSS 452



 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 86  HHRNPPDTP 60
           HH +PP+TP
Sbjct: 465 HHPHPPETP 473


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -1

Query: 290 YYSIACLPACLG*IKRNLRQDIRNDGCFQNQCC 192
           +Y +     C G  KR +R+D+ +  C + + C
Sbjct: 121 HYGVYSCEGCKGFFKRTVRKDL-SYACREEKSC 152


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -1

Query: 290 YYSIACLPACLG*IKRNLRQDIRNDGCFQNQCC 192
           +Y +     C G  KR +R+D+ +  C + + C
Sbjct: 121 HYGVYSCEGCKGFFKRTVRKDL-SYACREEKSC 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,098
Number of Sequences: 438
Number of extensions: 2179
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)