Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_F23
         (474 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   2.9  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   3.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   3.8  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   3.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   3.8  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   5.1  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   5.1  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   6.7  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   8.9  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 241 RLPSPAPALYRSISIITPNGEDTTFLSFDEC 149
           R  SP+P +       TPNG  +T + +  C
Sbjct: 111 RSASPSPGMGHMGHTPTPNGHPSTPIVYASC 141


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 382 KYTLDEKFTDHCPVSTKS 435
           ++TL++ FTD+C   T +
Sbjct: 208 RFTLEKFFTDYCNSKTNT 225


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 382 KYTLDEKFTDHCPVSTKS 435
           ++TL++ FTD+C   T +
Sbjct: 208 RFTLEKFFTDYCNSKTNT 225


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 180 KTQHSCPSMNVYVSLRNCKEVLSMALP 100
           +T H+    N    LRNC E L + +P
Sbjct: 50  RTTHNELEKNRRAHLRNCLEKLKVLVP 76


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 359 NKILPSEINILWMRNSRITVP 421
           NK  PS+ + L  RN  +T P
Sbjct: 564 NKKQPSDCDTLEYRNGEVTTP 584


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +2

Query: 302 QLKLKTVLGDESGLLH*WA--NKILPSEINILWMRNSRITVPSVP 430
           +L+++      +G++  W   ++ LP+ + IL  R   IT P  P
Sbjct: 786 ELQIQKQSHTPNGIVKTWIAHDRYLPNSLRILLKRFLDITTPPTP 830



 Score = 21.4 bits (43), Expect = 5.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 242 CGDRQVFRQW 271
           CG  Q FR+W
Sbjct: 648 CGQEQAFRKW 657


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 80  KYNRTALGNAIDKTSLQFLKET 145
           KY  T+ G + D+T  +  KET
Sbjct: 280 KYRETSKGRSRDRTERERSKET 301


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 80  KYNRTALGNAIDKTSLQFLKET 145
           KY  T+ G + D+T  +  KET
Sbjct: 291 KYRETSKGRSRDRTERERSKET 312


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 367 LTVGNKYTLDEKFTDHCPV 423
           L +GN++T  E    HC V
Sbjct: 178 LIMGNEHTYSETGPSHCVV 196


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 165 CPSMNVYVSLRNCKEVLSMALPKAVLL 85
           CPS  V   L+N K +  + +P  + +
Sbjct: 150 CPSQIVVFDLKNSKLLKQVKIPHDIAI 176


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,655
Number of Sequences: 438
Number of extensions: 2876
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)