Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_F19
         (457 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   1.6  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   1.6  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   3.6  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   4.8  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   4.8  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   4.8  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   4.8  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   4.8  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +1

Query: 145 RLTSIITPYVHYQSHVNVRLDINLPCRW 228
           +  S I P+++  +H   R ++   C+W
Sbjct: 326 KTVSCIDPWIYAINHPRYRQELQKRCKW 353


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +1

Query: 145 RLTSIITPYVHYQSHVNVRLDINLPCRW 228
           +  S I P+++  +H   R ++   C+W
Sbjct: 326 KTVSCIDPWIYAINHPRYRQELQKRCKW 353


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 232 IDIGEGFTLNNS**NKIISVFMNHGRISITDEHFIFY 342
           I +G+   +  +  NK I   +N G+I+I DE+   Y
Sbjct: 26  IRMGQSICMAKTGINKQIINDVNDGKINIEDENVQLY 62


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 339 KNKVLISDRNSTMIHKNANNFVSL 268
           K   +IS  ++  IH N NN+  L
Sbjct: 77  KEPKIISSLSNKTIHNNNNNYKKL 100


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 339 KNKVLISDRNSTMIHKNANNFVSL 268
           K   +IS  ++  IH N NN+  L
Sbjct: 77  KEPKIISSLSNKTIHNNNNNYKKL 100


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 339 KNKVLISDRNSTMIHKNANNFVSL 268
           K   +IS  ++  IH N NN+  L
Sbjct: 77  KEPKIISSLSNKTIHNNNNNYKKL 100


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 339 KNKVLISDRNSTMIHKNANNFVSL 268
           K   +IS  ++  IH N NN+  L
Sbjct: 77  KEPKIISSLSNKTIHNNNNNYKKL 100


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 339 KNKVLISDRNSTMIHKNANNFVSL 268
           K   +IS  ++  IH N NN+  L
Sbjct: 310 KEPKIISSLSNKTIHNNNNNYKKL 333


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,403
Number of Sequences: 438
Number of extensions: 2532
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)