SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_F17
         (229 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11531-1|CAA77630.1|  437|Homo sapiens elongation factor-1-gamma...    41   8e-04
X63526-1|CAA45089.1|  437|Homo sapiens homologue to elongation f...    41   8e-04
DQ185040-1|ABD14420.1|   87|Homo sapiens eukaryotic translation ...    41   8e-04
CR407625-1|CAG28553.1|  437|Homo sapiens EEF1G protein.                41   8e-04
BT006677-1|AAP35323.1|  437|Homo sapiens eukaryotic translation ...    41   8e-04
BC067738-1|AAH67738.1|  437|Homo sapiens eukaryotic translation ...    41   8e-04
BC031012-1|AAH31012.1|  437|Homo sapiens eukaryotic translation ...    41   8e-04
BC028179-1|AAH28179.1|  437|Homo sapiens eukaryotic translation ...    41   8e-04
BC015813-1|AAH15813.1|  437|Homo sapiens eukaryotic translation ...    41   8e-04
BC013918-1|AAH13918.1|  437|Homo sapiens eukaryotic translation ...    41   8e-04
BC009865-1|AAH09865.1|  437|Homo sapiens eukaryotic translation ...    41   8e-04
BC007949-1|AAH07949.2|  434|Homo sapiens EEF1G protein protein.        41   8e-04
BC006520-1|AAH06520.1|  437|Homo sapiens eukaryotic translation ...    41   8e-04
BC006509-1|AAH06509.1|  437|Homo sapiens eukaryotic translation ...    41   8e-04
BC000384-1|AAH00384.1|  437|Homo sapiens eukaryotic translation ...    41   8e-04
AY542307-1|AAT08176.1|  437|Homo sapiens GIG35 protein.                41   8e-04
AK122706-1|BAC85504.1|  814|Homo sapiens  ISOFORM.  protein.           29   2.0  
BC047590-1|AAH47590.1|  979|Homo sapiens HEAT repeat containing ...    27   8.1  

>Z11531-1|CAA77630.1|  437|Homo sapiens elongation factor-1-gamma
           protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>X63526-1|CAA45089.1|  437|Homo sapiens homologue to elongation
           factor 1-gamma  from A.salina protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>DQ185040-1|ABD14420.1|   87|Homo sapiens eukaryotic translation
           elongation factor 1 gamma protein.
          Length = 87

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 3   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 41


>CR407625-1|CAG28553.1|  437|Homo sapiens EEF1G protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>BT006677-1|AAP35323.1|  437|Homo sapiens eukaryotic translation
           elongation factor 1 gamma protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>BC067738-1|AAH67738.1|  437|Homo sapiens eukaryotic translation
           elongation factor 1 gamma protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>BC031012-1|AAH31012.1|  437|Homo sapiens eukaryotic translation
           elongation factor 1 gamma protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>BC028179-1|AAH28179.1|  437|Homo sapiens eukaryotic translation
           elongation factor 1 gamma protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>BC015813-1|AAH15813.1|  437|Homo sapiens eukaryotic translation
           elongation factor 1 gamma protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>BC013918-1|AAH13918.1|  437|Homo sapiens eukaryotic translation
           elongation factor 1 gamma protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>BC009865-1|AAH09865.1|  437|Homo sapiens eukaryotic translation
           elongation factor 1 gamma protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>BC007949-1|AAH07949.2|  434|Homo sapiens EEF1G protein protein.
          Length = 434

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 1   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 39


>BC006520-1|AAH06520.1|  437|Homo sapiens eukaryotic translation
           elongation factor 1 gamma protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>BC006509-1|AAH06509.1|  437|Homo sapiens eukaryotic translation
           elongation factor 1 gamma protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>BC000384-1|AAH00384.1|  437|Homo sapiens eukaryotic translation
           elongation factor 1 gamma protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>AY542307-1|AAT08176.1|  437|Homo sapiens GIG35 protein.
          Length = 437

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 118 GVLYTYPAHFRAYSAFIAAQYSGC--*L*K*PPIFVFGE 228
           G LYTYP ++RA+ A IAAQYSG    +   PP F FG+
Sbjct: 4   GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQ 42


>AK122706-1|BAC85504.1|  814|Homo sapiens  ISOFORM.  protein.
          Length = 814

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 120 GTLYLSSAFPRLQCVYRRSIFRVLTVKVAPDFC 218
           G  +LSS+ P LQC   RS  R + +K  P  C
Sbjct: 202 GVTFLSSSKPCLQCTCLRSRVRCMALKCPPSPC 234


>BC047590-1|AAH47590.1|  979|Homo sapiens HEAT repeat containing 4
           protein.
          Length = 979

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 141 RWISIKYPRQPGSEPSR 91
           RWI  K PR+PG+ P++
Sbjct: 169 RWIQSKRPRRPGASPNK 185


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,332,420
Number of Sequences: 237096
Number of extensions: 330247
Number of successful extensions: 852
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 76,859,062
effective HSP length: 54
effective length of database: 64,055,878
effective search space used: 1345173438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -