Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_F17
         (229 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46266-3|CAA86413.1|  156|Caenorhabditis elegans Hypothetical pr...    27   2.4  
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.     25   5.5  
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso...    25   5.5  
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso...    25   5.5  
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso...    25   5.5  
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso...    25   5.5  
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.     25   5.5  
Z82086-3|CAB04997.1|  325|Caenorhabditis elegans Hypothetical pr...    25   7.2  

>Z46266-3|CAA86413.1|  156|Caenorhabditis elegans Hypothetical
           protein C07B5.6 protein.
          Length = 156

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 150 RLQCVYRRSIFRVLTVKVAPD 212
           R++C+YRR I R+ T+K  P+
Sbjct: 115 RVKCLYRRGIPRLETIKEEPE 135


>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
          Length = 4250

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 222  EYKNRGLLSQLAPGILSGDKRTVSAEMRWISIKYPRQPGSEP 97
            E +  G LS      + GD +   +  R   I+ PR PG+EP
Sbjct: 1966 EDRTSGQLSCTTRAAILGDTQHEQSWQRIQEIEAPRAPGAEP 2007


>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform b protein.
          Length = 4203

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 222  EYKNRGLLSQLAPGILSGDKRTVSAEMRWISIKYPRQPGSEP 97
            E +  G LS      + GD +   +  R   I+ PR PG+EP
Sbjct: 1883 EDRTSGQLSCTTRAAILGDTQHEQSWQRIQEIEAPRAPGAEP 1924


>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform a protein.
          Length = 4488

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 222  EYKNRGLLSQLAPGILSGDKRTVSAEMRWISIKYPRQPGSEP 97
            E +  G LS      + GD +   +  R   I+ PR PG+EP
Sbjct: 2204 EDRTSGQLSCTTRAAILGDTQHEQSWQRIQEIEAPRAPGAEP 2245


>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform d protein.
          Length = 4369

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 222  EYKNRGLLSQLAPGILSGDKRTVSAEMRWISIKYPRQPGSEP 97
            E +  G LS      + GD +   +  R   I+ PR PG+EP
Sbjct: 2204 EDRTSGQLSCTTRAAILGDTQHEQSWQRIQEIEAPRAPGAEP 2245


>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform c protein.
          Length = 4447

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 222  EYKNRGLLSQLAPGILSGDKRTVSAEMRWISIKYPRQPGSEP 97
            E +  G LS      + GD +   +  R   I+ PR PG+EP
Sbjct: 2204 EDRTSGQLSCTTRAAILGDTQHEQSWQRIQEIEAPRAPGAEP 2245


>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
          Length = 4219

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 222  EYKNRGLLSQLAPGILSGDKRTVSAEMRWISIKYPRQPGSEP 97
            E +  G LS      + GD +   +  R   I+ PR PG+EP
Sbjct: 1899 EDRTSGQLSCTTRAAILGDTQHEQSWQRIQEIEAPRAPGAEP 1940


>Z82086-3|CAB04997.1|  325|Caenorhabditis elegans Hypothetical
           protein ZK228.6 protein.
          Length = 325

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +2

Query: 101 SLPGCLGYFI 130
           +LPGCLGYF+
Sbjct: 74  TLPGCLGYFL 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,598,036
Number of Sequences: 27780
Number of extensions: 49747
Number of successful extensions: 113
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 12,740,198
effective HSP length: 55
effective length of database: 11,212,298
effective search space used: 224245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)