Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_F15
         (501 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82057-4|CAB61024.2|  370|Caenorhabditis elegans Hypothetical pr...    30   0.82 
Z81119-10|CAB61032.2|  370|Caenorhabditis elegans Hypothetical p...    30   0.82 
L39925-1|AAA98782.1|  370|Caenorhabditis elegans cathepsin B-lik...    30   0.82 
L39890-1|AAA98788.1|  370|Caenorhabditis elegans cathepsin B-lik...    30   0.82 
Z81533-3|CAB04335.1|  327|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AF016450-7|AAB65986.1|  323|Caenorhabditis elegans Serpentine re...    28   3.3  
U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z82060-4|CAB04885.2|  434|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca...    27   7.6  

>Z82057-4|CAB61024.2|  370|Caenorhabditis elegans Hypothetical
           protein T10H4.12 protein.
          Length = 370

 Score = 30.3 bits (65), Expect = 0.82
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
 Frame = +1

Query: 172 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 348
           Y  S YK   +  V    T ++HY    AS   Y   Y   +  Y  H T  K +GG  V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286

Query: 349 PLL--KERRGEWYWFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 474
            ++      G  YW +     T +  +   ++  G  E  ++ GNVV
Sbjct: 287 KIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332


>Z81119-10|CAB61032.2|  370|Caenorhabditis elegans Hypothetical
           protein T10H4.12 protein.
          Length = 370

 Score = 30.3 bits (65), Expect = 0.82
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
 Frame = +1

Query: 172 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 348
           Y  S YK   +  V    T ++HY    AS   Y   Y   +  Y  H T  K +GG  V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286

Query: 349 PLL--KERRGEWYWFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 474
            ++      G  YW +     T +  +   ++  G  E  ++ GNVV
Sbjct: 287 KIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332


>L39925-1|AAA98782.1|  370|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 370

 Score = 30.3 bits (65), Expect = 0.82
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
 Frame = +1

Query: 172 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 348
           Y  S YK   +  V    T ++HY    AS   Y   Y   +  Y  H T  K +GG  V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286

Query: 349 PLL--KERRGEWYWFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 474
            ++      G  YW +     T +  +   ++  G  E  ++ GNVV
Sbjct: 287 KIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332


>L39890-1|AAA98788.1|  370|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 370

 Score = 30.3 bits (65), Expect = 0.82
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
 Frame = +1

Query: 172 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 348
           Y  S YK   +  V    T ++HY    AS   Y   Y   +  Y  H T  K +GG  V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286

Query: 349 PLL--KERRGEWYWFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 474
            ++      G  YW +     T +  +   ++  G  E  ++ GNVV
Sbjct: 287 KIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332


>Z81533-3|CAB04335.1|  327|Caenorhabditis elegans Hypothetical
           protein F36G9.5 protein.
          Length = 327

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +1

Query: 73  IPPIYEVLPEYFNNGEILHTAQRIGVHGSRMIEYYPSTYKWDNSVVIRSNTTVWHYHC 246
           I PI  +   +  NG   H A  I  +GS M+    + + W N+ ++  NT +W   C
Sbjct: 163 IYPILCIAIMFPGNGFCSHVAYPI--YGSIMLRVTDTMFGWTNNYILMFNTFLWVSIC 218


>AF016450-7|AAB65986.1|  323|Caenorhabditis elegans Serpentine
           receptor, class t protein70 protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 210 Y*VEYYCLALPLPKRFYVLLLT 275
           Y V Y+C+ALPL   F+VL+ T
Sbjct: 15  YGVAYFCIALPLFPVFFVLMKT 36


>U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical
           protein R05G6.7 protein.
          Length = 283

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 8/21 (38%), Positives = 17/21 (80%)
 Frame = +1

Query: 439 FGEIGELSGNVVNEGYNFGYM 501
           F ++G+ + ++ N+GYNFG++
Sbjct: 6   FADLGKSAKDLFNKGYNFGFL 26


>Z82060-4|CAB04885.2|  434|Caenorhabditis elegans Hypothetical
           protein T27F6.6 protein.
          Length = 434

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
 Frame = +1

Query: 31  STLHIHRSDLEG-YAIPPIYEV--LPEYFNNGEILHTAQRIGVHGSRMIEYYPSTYKWDN 201
           ST  +HR +  G Y I  +Y++  L E ++  + +  ++++          YP  + + +
Sbjct: 57  STDRVHRLNKIGQYMIDELYDIVGLQELWSYYDFVRLSEQVS-------SVYPY-FHYFH 108

Query: 202 SVVIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVVPL 354
           S    S   V+  H     +S   + YSLN   + HH+    W GG VV L
Sbjct: 109 SGFTGSGVCVFSRH---PIVSTLTNRYSLNG--FAHHIHRGDWFGGKVVGL 154


>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
           protein 4 protein.
          Length = 2325

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +1

Query: 112 NGEILHTAQRIGVHGSRMIEYYPSTYKWDNSVVIRSNTTVWHYHCQSASMSYYLHDYSL 288
           +G  +     + V+G  +IEY P+  K      +  +  V   + + AS+ +YL+D  L
Sbjct: 531 SGSNVKATANVQVNGDSLIEYGPADQKSLIGTNVEFSCEVAKEYVRKASVEWYLNDVLL 589


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,727,559
Number of Sequences: 27780
Number of extensions: 248334
Number of successful extensions: 721
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)