Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_F14
         (509 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032378-1|AAH32378.1|  194|Homo sapiens mitochondrial ribosomal...    51   3e-06
BC012489-1|AAH12489.1|  193|Homo sapiens mitochondrial ribosomal...    51   3e-06
BC009451-1|AAH09451.1|  160|Homo sapiens Unknown (protein for IM...    51   3e-06
AK223152-1|BAD96872.1|  194|Homo sapiens mitochondrial ribosomal...    51   3e-06
AK222933-1|BAD96653.1|  194|Homo sapiens mitochondrial ribosomal...    51   3e-06
AK026165-1|BAB15381.1|  194|Homo sapiens protein ( Homo sapiens ...    51   3e-06
AF320777-1|AAK97314.1|  193|Homo sapiens cervical cancer proto-o...    51   3e-06
AB049944-1|BAB40997.1|  194|Homo sapiens mitochondrial ribosomal...    51   3e-06

>BC032378-1|AAH32378.1|  194|Homo sapiens mitochondrial ribosomal
           protein S11 protein.
          Length = 194

 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +3

Query: 327 PGRLAAVKGLQMGGLDIISVTDSTHVSWNPPRARKARRL 443
           PGRL+A+ GL MGGL++IS+TD+T +  N  R RKAR+L
Sbjct: 156 PGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL 194


>BC012489-1|AAH12489.1|  193|Homo sapiens mitochondrial ribosomal
           protein S11 protein.
          Length = 193

 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +3

Query: 327 PGRLAAVKGLQMGGLDIISVTDSTHVSWNPPRARKARRL 443
           PGRL+A+ GL MGGL++IS+TD+T +  N  R RKAR+L
Sbjct: 155 PGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL 193


>BC009451-1|AAH09451.1|  160|Homo sapiens Unknown (protein for
           IMAGE:3531918) protein.
          Length = 160

 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +3

Query: 327 PGRLAAVKGLQMGGLDIISVTDSTHVSWNPPRARKARRL 443
           PGRL+A+ GL MGGL++IS+TD+T +  N  R RKAR+L
Sbjct: 122 PGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL 160


>AK223152-1|BAD96872.1|  194|Homo sapiens mitochondrial ribosomal
           protein S11 isoform a variant protein.
          Length = 194

 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +3

Query: 327 PGRLAAVKGLQMGGLDIISVTDSTHVSWNPPRARKARRL 443
           PGRL+A+ GL MGGL++IS+TD+T +  N  R RKAR+L
Sbjct: 156 PGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL 194


>AK222933-1|BAD96653.1|  194|Homo sapiens mitochondrial ribosomal
           protein S11 isoform a variant protein.
          Length = 194

 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +3

Query: 327 PGRLAAVKGLQMGGLDIISVTDSTHVSWNPPRARKARRL 443
           PGRL+A+ GL MGGL++IS+TD+T +  N  R RKAR+L
Sbjct: 156 PGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL 194


>AK026165-1|BAB15381.1|  194|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22512 fis, clone HRC11839. ).
          Length = 194

 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +3

Query: 327 PGRLAAVKGLQMGGLDIISVTDSTHVSWNPPRARKARRL 443
           PGRL+A+ GL MGGL++IS+TD+T +  N  R RKAR+L
Sbjct: 156 PGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL 194


>AF320777-1|AAK97314.1|  193|Homo sapiens cervical cancer
           proto-oncogene 2 protein.
          Length = 193

 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +3

Query: 327 PGRLAAVKGLQMGGLDIISVTDSTHVSWNPPRARKARRL 443
           PGRL+A+ GL MGGL++IS+TD+T +  N  R RKAR+L
Sbjct: 155 PGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL 193


>AB049944-1|BAB40997.1|  194|Homo sapiens mitochondrial ribosomal
           protein S11 protein.
          Length = 194

 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +3

Query: 327 PGRLAAVKGLQMGGLDIISVTDSTHVSWNPPRARKARRL 443
           PGRL+A+ GL MGGL++IS+TD+T +  N  R RKAR+L
Sbjct: 156 PGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL 194


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,473,559
Number of Sequences: 237096
Number of extensions: 1461929
Number of successful extensions: 2804
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2804
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)