Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_F14
         (509 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75552-5|CAA99938.1|  208|Caenorhabditis elegans Hypothetical pr...    41   6e-04
AF047663-7|AAC04448.1|  178|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z32683-5|CAA83617.1|  191|Caenorhabditis elegans Hypothetical pr...    28   4.5  
U50310-4|ABB51170.1|  409|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U50310-3|AAA92540.4|  411|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U37429-1|AAM98038.1|   79|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z75552-5|CAA99938.1|  208|Caenorhabditis elegans Hypothetical
           protein W04D2.5 protein.
          Length = 208

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = +3

Query: 327 PGRLAAVKGLQMGGLDIISVTDSTHVSWNPPRARKARRL 443
           PGR+  VKGL + G+ ++S++D T +    PR RK RR+
Sbjct: 170 PGRMTCVKGLTVAGVHVVSISDHTPLCELGPRPRKIRRI 208


>AF047663-7|AAC04448.1|  178|Caenorhabditis elegans Hypothetical
           protein W09G12.6 protein.
          Length = 178

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 3/91 (3%)
 Frame = +3

Query: 111 SLACVRVIELILLDKTERRNESEGG---RSPSAQGGWGRDLDRGSRTPEASRFQSVNAGA 281
           S+ C+ ++E        RRN+SEGG   RS S  G  G    R S    AS   S  A  
Sbjct: 10  SMICLALVEERRDRSNRRRNQSEGGSRSRSESWLGSSGSSRSRSSGRSAASAGSSQAASP 69

Query: 282 L*TQILGNPKKC*IMPGRLAAVKGLQMGGLD 374
                +G+  +     G  AA      GG D
Sbjct: 70  AGASAIGS-SQAGSSAGSPAAAAAGGSGGAD 99


>Z32683-5|CAA83617.1|  191|Caenorhabditis elegans Hypothetical
           protein R07E5.7 protein.
          Length = 191

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 175 VKADARRPLREDGAEISIEALALPRRLVSNQ*MQARSEHR 294
           +K DA RP  +DG ++  EAL  P R    Q   A   +R
Sbjct: 72  IKDDANRPKEKDGEDLVEEALKAPIRPDQEQFYTAEHSNR 111


>U50310-4|ABB51170.1|  409|Caenorhabditis elegans Hypothetical
           protein ZC487.1b protein.
          Length = 409

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +2

Query: 245 RGVSFPISECRRALNTDSWEPEKMLNY 325
           R +  PI++ RR +  D ++PE++L++
Sbjct: 49  RSLQKPIAQIRRDMEVDGFKPEQLLHF 75


>U50310-3|AAA92540.4|  411|Caenorhabditis elegans Hypothetical
           protein ZC487.1a protein.
          Length = 411

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +2

Query: 245 RGVSFPISECRRALNTDSWEPEKMLNY 325
           R +  PI++ RR +  D ++PE++L++
Sbjct: 49  RSLQKPIAQIRRDMEVDGFKPEQLLHF 75


>U37429-1|AAM98038.1|   79|Caenorhabditis elegans Hypothetical
           protein F09E5.14 protein.
          Length = 79

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = -3

Query: 435 LLFLLLVGSMIHACCL*LI*YLGHPF--ADLLQQPNDQA*FNIFSGSQESVFRARLHSLI 262
           +LFLLL+      CC   + Y G PF  ADL    + +  +   +G Q+ +  ARL  L+
Sbjct: 7   ILFLLLI-----VCCH--VVY-GGPFERADLTMIEDPRFVYKRANGDQKELVMARLQQLL 58

Query: 261 GNETPRECESLDR 223
           G E   E +S  R
Sbjct: 59  GPEAFTEIDSHGR 71


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,467,885
Number of Sequences: 27780
Number of extensions: 225823
Number of successful extensions: 601
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)