Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_F14
         (509 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   4.2  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    21   7.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.8  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   9.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.8  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 153 KTERRNESEGGRSP 194
           KT  RN+SE  RSP
Sbjct: 325 KTPMRNDSERNRSP 338


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 55  SNGFSFPPPTLCYYR 99
           ++G+ F PP   +YR
Sbjct: 69  ASGYGFVPPNQAFYR 83


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 23  PSVRICDNILVRMVLVSHR 79
           P + +  NI V+ VLV HR
Sbjct: 656 PLLLVLSNIHVKEVLVHHR 674


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 64  NHSNKYIVTDAN*RENIYY 8
           N++NKY   + N  + +YY
Sbjct: 99  NYNNKYNYNNNNYNKKLYY 117


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 23  PSVRICDNILVRMVLVSHR 79
           P + +  NI V+ VLV HR
Sbjct: 656 PLLLVLSNIHVKEVLVHHR 674


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,166
Number of Sequences: 438
Number of extensions: 2693
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)