BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_F12
(471 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 26 0.76
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 25 1.3
AF532982-1|AAQ10289.1| 459|Anopheles gambiae putative RNA methy... 25 1.3
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 24 2.3
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 23 4.1
EF989011-1|ABS17666.1| 399|Anopheles gambiae serpin 7 protein. 23 4.1
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 23 4.1
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 23 7.1
DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein. 22 9.4
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 22 9.4
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 22 9.4
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 22 9.4
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 25.8 bits (54), Expect = 0.76
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 120 PMDTTIVHHVNSVCGSHGQYGEEEKHESFHCRIVSEL 10
P+D+ I H + +CG + +EK E+F ++ L
Sbjct: 2729 PIDS-ISHGLEQICGGSADFPSQEKAENFLMHLLMPL 2764
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 25.0 bits (52), Expect = 1.3
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -3
Query: 193 PLGPFDG*EKKGSGFAITTWSLLPSDGHHYCPPREL--CLRQPWPI 62
PLG D + K F WSL +G Y E+ +RQ W +
Sbjct: 974 PLGIVDTVKAKAKQFMQRVWSLKKENGDSYGWDEEIPQQMRQEWEV 1019
>AF532982-1|AAQ10289.1| 459|Anopheles gambiae putative RNA
methylase protein.
Length = 459
Score = 25.0 bits (52), Expect = 1.3
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 230 RFQSSQLSTQAIRQPSRPWWEVNVS*R*AILKLGEMMINL 349
R + Q+ T A P RP+W V + A KL ++L
Sbjct: 29 RIWNIQMETPADHNPERPFWVVGLQNDEAARKLASRSMSL 68
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 403 FVLVVVDRVQSRIFFSVT 456
+V +V+DR+Q IFF VT
Sbjct: 472 YVAMVIDRLQLYIFFIVT 489
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 23.4 bits (48), Expect = 4.1
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +3
Query: 147 ANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 257
A+PD F S P + +S ++ P +PP
Sbjct: 370 AHPDHFLDHRSPSPQRGNQSLSQMTEILEAIQPEFPP 406
>EF989011-1|ABS17666.1| 399|Anopheles gambiae serpin 7 protein.
Length = 399
Score = 23.4 bits (48), Expect = 4.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 18 TLFDNESFRVFLLRRIGHGCRKQSS 92
TLFD E F VF + G KQS+
Sbjct: 319 TLFDREGFAVFRDHKSMLGALKQST 343
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 150 SQ*QRGHYCRPMDTTIVHHVNSVCGSHGQYG 58
SQ Q H + +D + NSV S +YG
Sbjct: 625 SQLQHSHQAQSLDQQSQENSNSVANSEQRYG 655
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 22.6 bits (46), Expect = 7.1
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 269 QPSRPWWEV 295
+P RPWW V
Sbjct: 78 RPGRPWWSV 86
>DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein.
Length = 383
Score = 22.2 bits (45), Expect = 9.4
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -3
Query: 133 SLLPSDGHHYCPPRELC 83
S DG HYC P C
Sbjct: 338 STASGDGKHYCYPHFTC 354
>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
Length = 1009
Score = 22.2 bits (45), Expect = 9.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 245 GMIEIDERRSSAYGFII 195
G+++ DER +SAY F +
Sbjct: 680 GLMDCDERFTSAYQFAV 696
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 22.2 bits (45), Expect = 9.4
Identities = 18/80 (22%), Positives = 28/80 (35%)
Frame = +3
Query: 51 LLRRIGHGCRKQSSRGGQ*WCPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFV 230
L R R ++ GG P NS +PD S ++ S + ++ G
Sbjct: 848 LARHNSKSRRLITATGGMLKMPPSSNSSPSSYPSPDVVISGLASNNSSSSNLVAAGMVIN 907
Query: 231 DFNHPNYPPKRYDNPLARGG 290
D N+ +Y GG
Sbjct: 908 DENNLHYHRSASPKATVAGG 927
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 22.2 bits (45), Expect = 9.4
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3
Query: 136 WSLLPSDGHH 107
+SLL SDGHH
Sbjct: 122 YSLLDSDGHH 131
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,018
Number of Sequences: 2352
Number of extensions: 9359
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -