Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_F03
         (314 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70210-9|CAE17897.1|  403|Caenorhabditis elegans Hypothetical pr...    28   1.2  
AL117207-17|CAI79269.1|  421|Caenorhabditis elegans Hypothetical...    27   3.8  
AF003384-2|AAL08040.1|  428|Caenorhabditis elegans Acyltransfera...    26   5.0  
AF003384-1|AAK71374.2|  415|Caenorhabditis elegans Acyltransfera...    26   5.0  
U40938-2|AAQ65206.1|  463|Caenorhabditis elegans Hypothetical pr...    25   8.7  
U40938-1|AAA81695.2|  465|Caenorhabditis elegans Hypothetical pr...    25   8.7  
U29154-3|AAA68419.2|  283|Caenorhabditis elegans Hypothetical pr...    25   8.7  

>Z70210-9|CAE17897.1|  403|Caenorhabditis elegans Hypothetical
           protein K08H2.9 protein.
          Length = 403

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 13/43 (30%), Positives = 27/43 (62%)
 Frame = +2

Query: 98  ASQATCMNIKIQKADRKQREFIY*QERMEQISGREPSRMDPNS 226
           A Q +C  IKI   +R+ +EF++ +++  Q +G  P ++ P++
Sbjct: 146 AFQGSCPQIKISPTNRECKEFLHNRDKYRQAAG-GPFQLYPSN 187


>AL117207-17|CAI79269.1|  421|Caenorhabditis elegans Hypothetical
           protein Y60A3A.25 protein.
          Length = 421

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 165 IDKNGWNKSQDGNRPEWIPIQNGYRIQYPLDNN 263
           +D   + + QD N   W+ + N  + Q P DNN
Sbjct: 106 MDMQPYQEYQDNNESGWVDLNNDNQFQQP-DNN 137


>AF003384-2|AAL08040.1|  428|Caenorhabditis elegans
           Acyltransferase-like protein 14,isoform b protein.
          Length = 428

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 61  KWIRARFLYWVYSQSGDLHEY*D 129
           +W+++   YW Y+   D++EY D
Sbjct: 87  RWLQSFIAYWGYTAGYDVYEYGD 109


>AF003384-1|AAK71374.2|  415|Caenorhabditis elegans
           Acyltransferase-like protein 14,isoform a protein.
          Length = 415

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 61  KWIRARFLYWVYSQSGDLHEY*D 129
           +W+++   YW Y+   D++EY D
Sbjct: 85  RWLQSFIAYWGYTAGYDVYEYGD 107


>U40938-2|AAQ65206.1|  463|Caenorhabditis elegans Hypothetical
           protein D1009.3b protein.
          Length = 463

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 308 WELHLIRKNEGYKIIIVVQRVLNSVTILNWDPF 210
           W+++  +K +GYKI I  + V N +T    DPF
Sbjct: 333 WKVNFGKKQDGYKIQITEEGVGN-LTYNGVDPF 364


>U40938-1|AAA81695.2|  465|Caenorhabditis elegans Hypothetical
           protein D1009.3a protein.
          Length = 465

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 308 WELHLIRKNEGYKIIIVVQRVLNSVTILNWDPF 210
           W+++  +K +GYKI I  + V N +T    DPF
Sbjct: 335 WKVNFGKKQDGYKIQITEEGVGN-LTYNGVDPF 366


>U29154-3|AAA68419.2|  283|Caenorhabditis elegans Hypothetical
           protein T07F12.1 protein.
          Length = 283

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 204 RPEWIPIQNGYRIQYPLDNNY 266
           RP WIP ++  ++ YP+  NY
Sbjct: 131 RPCWIPPKDLKKLGYPVQENY 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,847,674
Number of Sequences: 27780
Number of extensions: 160724
Number of successful extensions: 405
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)