Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_F03
(314 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 0.66
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 23 0.66
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 2.0
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 2.7
DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein. 21 3.5
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 3.5
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 4.7
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 20 6.2
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 20 8.1
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 20 8.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 20 8.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 20 8.1
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 20 8.1
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 20 8.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 20 8.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 20 8.1
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.4 bits (48), Expect = 0.66
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +1
Query: 1 SQSVLYLCYKICHILFIYNLKWIRARFLYWVYSQSGDLHE 120
++ +L Y +C+ +++Y + + YW Q+ HE
Sbjct: 208 NRGLLSASYLVCYGIWVYFVPLFLIIYSYWFIIQAVAAHE 247
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 23.4 bits (48), Expect = 0.66
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +1
Query: 1 SQSVLYLCYKICHILFIYNLKWIRARFLYWVYSQSGDLHE 120
++ +L Y +C+ +++Y + + YW Q+ HE
Sbjct: 84 NRGLLSASYLVCYGIWVYFVPLFLIIYSYWFIIQAVAAHE 123
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 2.0
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +3
Query: 156 NLFIDKNGWNKSQDGNRPEW 215
N+F+DK G++ N +W
Sbjct: 198 NIFLDKKGFHMDGYTNNSKW 217
Score = 20.6 bits (41), Expect = 4.7
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 31 ICHILFIYNLKW 66
ICHIL + +L W
Sbjct: 292 ICHILCMSDLHW 303
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 2.7
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = +1
Query: 61 KWIRARFLYWV 93
+W++ FLYW+
Sbjct: 330 EWVKVVFLYWL 340
Score = 19.8 bits (39), Expect = 8.1
Identities = 5/6 (83%), Positives = 6/6 (100%)
Frame = -3
Query: 267 YNCCPK 250
YNCCP+
Sbjct: 211 YNCCPE 216
>DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein.
Length = 135
Score = 21.0 bits (42), Expect = 3.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 141 IENNANLFIDKNGWNK 188
I A +F+D+NG NK
Sbjct: 84 IREIAEIFLDENGVNK 99
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.0 bits (42), Expect = 3.5
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 185 VPSVLVNK*IRVVFYLP 135
+P +L+N +VFY+P
Sbjct: 222 LPCILINSVALLVFYVP 238
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 20.6 bits (41), Expect = 4.7
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 8/34 (23%)
Frame = +3
Query: 180 WNKSQDGNRPEWI--------PIQNGYRIQYPLD 257
W G RP W I+ GYR+ P+D
Sbjct: 829 WEVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMD 862
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 20.2 bits (40), Expect = 6.2
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 120 ILRYKRQIENNANLFIDKNGWNKSQDGN-RPEW 215
I R+K + +N N F+ KN ++S N P W
Sbjct: 67 IPRWKNGVPSNLNFFL-KNDESESPKLNPYPNW 98
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 19.8 bits (39), Expect = 8.1
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = +3
Query: 123 LRYKRQIENNANLFIDKNGWNKSQDGNR---PEWIP 221
L + +EN N FI+ G N R P W+P
Sbjct: 210 LNHDYNLENKLNYFIEDIGLNTYYFFLRQAFPFWLP 245
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +3
Query: 261 NYNFIAFIFPNQVQFP 308
N+N+ F+ N + FP
Sbjct: 236 NHNYPPFMLSNSLNFP 251
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/22 (27%), Positives = 12/22 (54%)
Frame = +1
Query: 1 SQSVLYLCYKICHILFIYNLKW 66
S +L +CY + ++ + KW
Sbjct: 479 SFGLLNICYWVIYVTYQEEFKW 500
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 249 PLDNNYNF 272
PL NNYN+
Sbjct: 87 PLSNNYNY 94
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 185 VPSVLVNK*IRVVFYLP 135
+P+VL++ +VFYLP
Sbjct: 242 LPTVLISFLCVLVFYLP 258
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +3
Query: 261 NYNFIAFIFPNQVQFP 308
N+N+ F+ N + FP
Sbjct: 236 NHNYPPFMLSNSLNFP 251
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 19.8 bits (39), Expect = 8.1
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -1
Query: 263 IVVQRVLNSVTILNWDPFGTVPVLRFVPSVLVNK*IRVVFYLPFVS*Y 120
+V Q V ++ G VLR V V +RVV +L S Y
Sbjct: 127 VVAQAYKVDVEVIGGASRGCTAVLRCVVPSFVKDLVRVVSWLQEPSFY 174
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 19.8 bits (39), Expect = 8.1
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -1
Query: 263 IVVQRVLNSVTILNWDPFGTVPVLRFVPSVLVNK*IRVVFYLPFVS*Y 120
+V Q V ++ G VLR V V +RVV +L S Y
Sbjct: 127 VVAQAYKVDVEVIGGASRGCTAVLRCVVPSFVKDLVRVVSWLQEPSFY 174
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,827
Number of Sequences: 438
Number of extensions: 2352
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6719922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -