Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_F02
(613 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0208 - 26782955-26783275,26784317-26784632,26784732-26784835 33 0.24
03_05_0492 - 24874517-24874960,24875672-24875815,24876214-248762... 31 0.95
01_03_0130 + 12853325-12853948,12854657-12854822,12854907-128551... 31 0.95
03_05_0851 + 28225608-28226570 30 1.3
07_01_0134 + 977527-977757,977842-977937,978479-978519,979550-97... 30 1.7
03_05_0730 + 27208293-27208813,27209052-27209173,27210429-272104... 30 1.7
02_03_0052 - 14456925-14457176,14457277-14457437,14457843-144579... 29 2.2
07_01_0580 + 4316895-4317053,4317530-4318024,4318124-4319305 29 2.9
03_04_0162 + 17858802-17861168 29 3.8
01_07_0106 - 41107673-41107942,41108362-41108574,41108877-411090... 29 3.8
11_06_0610 - 25449085-25453284 28 5.1
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 28 5.1
05_02_0085 - 6465126-6466049 28 5.1
04_03_0737 - 19152942-19154930 28 6.7
01_06_1030 - 33942841-33943790,33944748-33944811 28 6.7
12_02_0559 - 20462217-20462780 27 8.9
12_02_0558 - 20453998-20454561 27 8.9
12_02_0506 - 19794383-19794670,19795066-19795140,19795337-197987... 27 8.9
11_01_0613 + 4904869-4905126,4905389-4906138,4907708-4907767 27 8.9
07_03_1709 - 28873172-28873327,28873519-28873584,28874067-288741... 27 8.9
03_04_0197 + 18375497-18375943,18376666-18377052,18377166-183774... 27 8.9
02_03_0243 - 16791789-16793306 27 8.9
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458... 27 8.9
>02_05_0208 - 26782955-26783275,26784317-26784632,26784732-26784835
Length = 246
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +3
Query: 243 SGGGGSAEVMVYSLGWGMGEPERRGADRKRAQPSAVVHPPLSPDDGHEVDVL 398
S G G A+ V LG G+G P+ R R+ A+ PPL P + + L
Sbjct: 46 SSGSGDAKP-VKGLGLGLGLPDPRAPRRRAAKQPTAAPPPLPPRGAYASEAL 96
>03_05_0492 -
24874517-24874960,24875672-24875815,24876214-24876282,
24876452-24876570,24878292-24878580
Length = 354
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 246 GGGGSAEVMVYSLGWGMGEPERRGADRKRAQPSAVVHPPLSPDDGH 383
GGGG+ EV+ +S+ G EP G + + + PL +GH
Sbjct: 82 GGGGAPEVLKFSVFSGNLEPGDTGEKNREHSATIAMQSPLPEYNGH 127
>01_03_0130 +
12853325-12853948,12854657-12854822,12854907-12855118,
12855372-12855865,12856228-12856276,12856367-12856690
Length = 622
Score = 30.7 bits (66), Expect = 0.95
Identities = 19/68 (27%), Positives = 26/68 (38%)
Frame = -2
Query: 489 CNSRVLSGLITVLSLSTSNLV*PPT*LCRGQVHRLHGRHLAKVAGVRRQTAGRACDPRRA 310
C R+LS + +T P C H LHGR L +A Q ++ +
Sbjct: 14 CRRRLLSSATAAAAAATVATATPLFPRCPHPHHHLHGRRLPFLASAASQQQQQSGQTAAS 73
Query: 309 VPAPPYPS 286
PP PS
Sbjct: 74 PATPPIPS 81
>03_05_0851 + 28225608-28226570
Length = 320
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = -2
Query: 384 HGRHLAKVAGVRRQTAGRACDPRRAVPAPPYPSQESTPLLRQSRRHRCPLDNKL 223
HG K R+ A PRR A P P +ES R+ R R N++
Sbjct: 149 HGHSDGKKPAKPRRAAANPKPPRRLANAHPVPDKESRAKARERARERTKEKNRM 202
>07_01_0134 +
977527-977757,977842-977937,978479-978519,979550-979661,
980100-980180,980502-980567
Length = 208
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 243 SGGGGSAEVMVYSLGWGMGEPERRGADRKRAQPSAVV 353
SGGGG+A L G P RR R R+ P +V
Sbjct: 9 SGGGGAAPEAQQQLSGGGDTPRRRRPTRSRSDPLLIV 45
>03_05_0730 +
27208293-27208813,27209052-27209173,27210429-27210477,
27210689-27210938,27211474-27211619,27211699-27211846,
27212544-27212612,27212641-27212784
Length = 482
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/87 (28%), Positives = 35/87 (40%)
Frame = +3
Query: 189 THWDFTTSGLKEVYCQVDSGGGGSAEVMVYSLGWGMGEPERRGADRKRAQPSAVVHPPLS 368
T + +G ++ VD+ GG SLGW G GA+ RA S VHP
Sbjct: 101 TRAELVAAGRADLAAAVDACGGW------LSLGWSSG-----GAEAGRASSSVGVHPDYP 149
Query: 369 PDDGHEVDVLGLYTIRWGVIPGYWCST 449
P+ G G + G + W S+
Sbjct: 150 PEAGAAAAAGGASDLAQGAV---WASS 173
>02_03_0052 -
14456925-14457176,14457277-14457437,14457843-14457914,
14458105-14458221,14458310-14458322,14458917-14458946,
14459837-14460010,14460276-14460417,14460731-14460792,
14461047-14461643
Length = 539
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = -2
Query: 318 RRAVPAPPYPSQESTPLLRQS--RRHRCPL 235
RRA PP PS + P + S HRCPL
Sbjct: 146 RRAATPPPLPSHAAGPCRKTSTGHNHRCPL 175
>07_01_0580 + 4316895-4317053,4317530-4318024,4318124-4319305
Length = 611
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 464 KPLNTRELHFYQNIPEDIQSFVPRYKDSKCIGMATLA 574
KP T E+H+ + DI+ P S C+ MAT A
Sbjct: 575 KPKTTMEVHYKMDGNGDIEGGAPAMTPSPCMPMATAA 611
>03_04_0162 + 17858802-17861168
Length = 788
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 201 FTTSGLKEVYCQVDSGGGGSAEVMVYSLGWGMGE 302
F+ G K+ + SGGGG EV+ SL W G+
Sbjct: 736 FSGVGEKKGFSVTVSGGGGGGEVVEGSLSWVSGK 769
>01_07_0106 -
41107673-41107942,41108362-41108574,41108877-41109041,
41109431-41109649,41110205-41110324,41110427-41110489,
41111034-41111606,41111691-41111858,41112414-41112495,
41112667-41112743,41113031-41113101,41114315-41114363
Length = 689
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 309 VPAPPYPSQESTPLLRQSRRHRCPL 235
+PAPPYP +E+ P+LR+ H P+
Sbjct: 222 IPAPPYPVKEA-PILREVPVHISPV 245
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 279 SLGWGMGEPERRGADRKRAQPSAVVHPPLSPD 374
S GW PER+ A +A+P PP +P+
Sbjct: 515 SSGWLPKSPERKKAPPPQAEPPTEYSPPATPE 546
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 237 VDSGGGGSAEVMVYSLGWGMGEPERRGADRKRAQPSAVV 353
++SGGGG+ + G G+ ERR D KR Q A++
Sbjct: 321 LNSGGGGAGSSDPAARRGGSGKQERRLLDPKRLQNVAIM 359
>05_02_0085 - 6465126-6466049
Length = 307
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 346 ADGWARLRSAPRRSGSPIPQPREYTITSAE 257
A G+ RLRS PR P P+P + S +
Sbjct: 88 AAGFRRLRSPPRSPSPPTPKPNQVAAVSPQ 117
>04_03_0737 - 19152942-19154930
Length = 662
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Frame = -2
Query: 405 RGQVHRLHGRHLAKVAGVR------RQTAGRACDPRRAVPAPPYPSQESTPLLRQ 259
R VHRL RH A G R R+ P PP P Q + PL R+
Sbjct: 28 RAPVHRLRLRHHATRVGCSTVSVSTRPATTTTTTTTRSQPPPPQPPQAAEPLQRR 82
>01_06_1030 - 33942841-33943790,33944748-33944811
Length = 337
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 186 VTHWDFTTSGLKEVYCQVDSGGGGSAEVMVYSLGWGMG 299
VT+ + + L VY ++ GG EV+V GW G
Sbjct: 228 VTYTNMFDAILDAVYAALEKAGGQGLEVVVSETGWPSG 265
>12_02_0559 - 20462217-20462780
Length = 187
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +3
Query: 240 DSGGG-GSAEVMVYSLGWGMGEPERRGADRKRAQPSAVVHPPLSPDDGHEVDVLGLYTIR 416
D+GGG G+A G R+G +R+ A A L E GL+ I
Sbjct: 96 DAGGGDGAAGRRTVEAAPAAGGGRRQGRERRTAGRGAAAVGELGKGLKRENARRGLHFIG 155
Query: 417 WGVIPG 434
WG PG
Sbjct: 156 WGREPG 161
>12_02_0558 - 20453998-20454561
Length = 187
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +3
Query: 240 DSGGG-GSAEVMVYSLGWGMGEPERRGADRKRAQPSAVVHPPLSPDDGHEVDVLGLYTIR 416
D+GGG G+A G R+G +R+ A A L E GL+ I
Sbjct: 96 DAGGGDGAAGRRTVEAAPAAGGGRRQGRERRTAGRGAAAVGELGKGLKRENARRGLHFIG 155
Query: 417 WGVIPG 434
WG PG
Sbjct: 156 WGREPG 161
>12_02_0506 -
19794383-19794670,19795066-19795140,19795337-19798704,
19799503-19799671,19799758-19799850
Length = 1330
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3
Query: 246 GGGGSAEVMVYSLGWGMGEPERRGADRKRAQPSA 347
G GGS V W EPERR A R+R +P+A
Sbjct: 37 GMGGSKPV-----DWCDEEPERRRAQRRRTRPAA 65
>11_01_0613 + 4904869-4905126,4905389-4906138,4907708-4907767
Length = 355
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 309 RRGADRKRAQPSAVVHPPLSPDDGHEVDVLGL 404
R+ R RA +A V PP SPD G ++LG+
Sbjct: 26 RQRKGRGRAAAAARVPPPESPDAGARRELLGI 57
>07_03_1709 -
28873172-28873327,28873519-28873584,28874067-28874127,
28875406-28875462,28876301-28876531,28876685-28876799,
28876897-28877136,28877222-28877316,28877406-28877585,
28877663-28877839,28877920-28878890
Length = 782
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 243 SGGGGSAEVMVYSLGWGMGEPERR 314
S GGG + Y+LGW G P R
Sbjct: 191 SPGGGDGGLFSYNLGWANGGPGHR 214
>03_04_0197 +
18375497-18375943,18376666-18377052,18377166-18377410,
18377651-18378221
Length = 549
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 242 QRWRRLCRSNGVLSWLGYGGAGTAR 316
+RWRR CR G + + GA AR
Sbjct: 82 RRWRRWCRRAGAAGVVAHSGAAGAR 106
>02_03_0243 - 16791789-16793306
Length = 505
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 230 LSSGQRWRRLCRSNGVLSWLGYGGAGTARRGSQAR 334
+++ RW LCR +G W G GGA S+ R
Sbjct: 434 VAAALRWASLCRRSG---WRGSGGASAKTSPSRGR 465
>01_06_0840 +
32343700-32344138,32345329-32345419,32345584-32345866,
32346023-32346097,32346470-32346514,32346889-32346979,
32347060-32347118,32347621-32347704,32348109-32348168,
32348585-32348637,32348724-32348757,32349334-32350335,
32350477-32351035,32351873-32352372,32352793-32353200
Length = 1260
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -2
Query: 402 GQVHRLHGRHLAKVAGVRRQTAGRACDPR-RAVPAPPYPSQESTPLLRQSRRHR 244
G+ R G + A G R AGRA P A PP +E R RR R
Sbjct: 35 GRAQRRRGSNEATACGKGRSRAGRAASPDVVATKPPPLHDEEEEEGGRMVRRGR 88
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,101,245
Number of Sequences: 37544
Number of extensions: 421924
Number of successful extensions: 1757
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1755
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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