Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_F02
         (613 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   1.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   4.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   5.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.5  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.5  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = -2

Query: 462 ITVLSLSTSNLV*PPT*LCRGQVHRLHGRHLAKVAGVRRQTAGRACDPRRAVPAPPYPSQ 283
           I  L+LST+ +  PP      QV  +    ++ +    R  AG    P    P PP P+ 
Sbjct: 367 IPKLNLSTALMSQPPPNFGVSQVSPVS---MSALVSAVRSPAGGQLPPSAGAPMPPIPNM 423

Query: 282 ES 277
            +
Sbjct: 424 SN 425


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 191 CNTVHDKIGCFYHKHNHYCNYSG*HKI 111
           C T + K  C + + +  C Y+  HKI
Sbjct: 437 CKTCNSKTKCCFAQDDGLCPYTLKHKI 463


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 42  NIRWRRNNVILYRLSNKFQ 98
           NI  R+NN  ++ +SNK+Q
Sbjct: 363 NIYERQNNEYIWIVSNKYQ 381


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 167 GCFYHKHNHYCNYSG*HKIL 108
           G  YH  NH+ +++  H IL
Sbjct: 271 GGVYHLDNHHVHHANHHAIL 290


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 263 RSNGVLSWLGYGGAGTAR 316
           + NGV +W+G G    +R
Sbjct: 478 KGNGVYAWIGAGRDSDSR 495


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +2

Query: 386 SRCTWPLHNQVGGHTRLLVLNDSTVIKP 469
           S CTW L+     HT      D T I P
Sbjct: 10  SYCTWELNATNSPHTCRTKNGDYTKIMP 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,634
Number of Sequences: 438
Number of extensions: 3902
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)