SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_E24
         (494 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1872|AAF50117.3|  410|Drosophila melanogaster CG32079-P...    30   1.5  
AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein...    30   2.0  
BT010078-1|AAQ22547.1|  678|Drosophila melanogaster LD09850p pro...    29   4.6  
AE014134-3246|AAG22447.2|  678|Drosophila melanogaster CG2508-PA...    29   4.6  
U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous po...    28   8.0  
AE014297-4275|AAF56820.1| 2417|Drosophila melanogaster CG1451-PA...    28   8.0  

>AE014296-1872|AAF50117.3|  410|Drosophila melanogaster CG32079-PA
           protein.
          Length = 410

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 121 ILLCLWNFGIDIVIKIFIEKEL 186
           ILLC ++FG+D V  +FI K L
Sbjct: 95  ILLCAYHFGVDCVYVVFIAKSL 116


>AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein
           protein.
          Length = 2797

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +1

Query: 61  FSLFTCRIN*TIYKRTRLKYILLCLWNFGIDIVIK 165
           ++L  CR + TI KRT  K+++L   NF ID+ +K
Sbjct: 243 YALRKCRTDKTIMKRTNNKFLVLL--NFFIDLTVK 275


>BT010078-1|AAQ22547.1|  678|Drosophila melanogaster LD09850p
           protein.
          Length = 678

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -3

Query: 438 DLGQRNEEVYYGLGQKYTLVSLGEYSL 358
           ++ +R+   +YGLGQ Y ++ +  YSL
Sbjct: 380 EVNKRDYRAWYGLGQAYEIIKMHYYSL 406


>AE014134-3246|AAG22447.2|  678|Drosophila melanogaster CG2508-PA
           protein.
          Length = 678

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -3

Query: 438 DLGQRNEEVYYGLGQKYTLVSLGEYSL 358
           ++ +R+   +YGLGQ Y ++ +  YSL
Sbjct: 380 EVNKRDYRAWYGLGQAYEIIKMHYYSL 406


>U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous
            polyposis coli protein.
          Length = 2416

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/69 (28%), Positives = 29/69 (42%)
 Frame = +3

Query: 270  LRQPKSLTDDSTVEASKSILSADAKEWYPPNYTHQVTPTYTSDLTHNRLPRFSVQDRLRQ 449
            L QP + TDD T E + S+ S D     PP+    +   Y      + L +       R 
Sbjct: 1805 LLQPAA-TDDDTTEMTFSLNSLDLDNIRPPSGMESLNSCYQDHSQPSSLRQAMPSKSPRF 1863

Query: 450  AQDQYPYNL 476
            A+  +P NL
Sbjct: 1864 ARKMFPANL 1872


>AE014297-4275|AAF56820.1| 2417|Drosophila melanogaster CG1451-PA
            protein.
          Length = 2417

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/69 (28%), Positives = 29/69 (42%)
 Frame = +3

Query: 270  LRQPKSLTDDSTVEASKSILSADAKEWYPPNYTHQVTPTYTSDLTHNRLPRFSVQDRLRQ 449
            L QP + TDD T E + S+ S D     PP+    +   Y      + L +       R 
Sbjct: 1806 LLQPAA-TDDDTTEMTFSLNSLDLDNIRPPSGMESLNSCYQDHSQPSSLRQAMPSKSPRF 1864

Query: 450  AQDQYPYNL 476
            A+  +P NL
Sbjct: 1865 ARKMFPANL 1873


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,637,720
Number of Sequences: 53049
Number of extensions: 335207
Number of successful extensions: 1092
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -