Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_E24
(494 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81050-10|CAB02860.1| 329|Caenorhabditis elegans Hypothetical p... 28 4.3
Z75955-1|CAB00111.2| 796|Caenorhabditis elegans Hypothetical pr... 27 5.7
AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical ... 27 5.7
AF328908-1|AAK01123.1| 796|Caenorhabditis elegans voltage-gated... 27 5.7
AF319616-1|AAG49526.1| 796|Caenorhabditis elegans CLC-type chlo... 27 5.7
Z92789-5|CAB07217.1| 397|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical p... 27 9.9
Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical p... 27 9.9
Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical p... 27 9.9
Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical p... 27 9.9
EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform... 27 9.9
>Z81050-10|CAB02860.1| 329|Caenorhabditis elegans Hypothetical
protein C50B6.12 protein.
Length = 329
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 310 KLQNQFYQLMLKNGTLQTILTK*HQRILLT*PIIDFLVSLS 432
KL+NQF++ ++ L TI ILL+ PI++ VS +
Sbjct: 237 KLENQFFKTIIIQIALPTIFLTFPMMILLSTPILNLEVSFN 277
>Z75955-1|CAB00111.2| 796|Caenorhabditis elegans Hypothetical
protein R07B7.1 protein.
Length = 796
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 112 LKYILLCLWNFGIDIVIKIFI 174
++Y LL LW FGI + +FI
Sbjct: 479 IEYFLLTLWTFGISVPSGVFI 499
>AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical
protein Y113G7A.11 protein.
Length = 412
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 282 KSLTDDSTVEASKSILSADAKEWYPPNYTHQV 377
+ + D+ST++A K D K W+P + H+V
Sbjct: 266 REIVDNSTIDAMKK----DQKRWFPESQLHKV 293
>AF328908-1|AAK01123.1| 796|Caenorhabditis elegans voltage-gated
chloride channelCLH-6 protein.
Length = 796
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 112 LKYILLCLWNFGIDIVIKIFI 174
++Y LL LW FGI + +FI
Sbjct: 479 IEYFLLTLWTFGISVPSGVFI 499
>AF319616-1|AAG49526.1| 796|Caenorhabditis elegans CLC-type
chloride channel CLH-6 protein.
Length = 796
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 112 LKYILLCLWNFGIDIVIKIFI 174
++Y LL LW FGI + +FI
Sbjct: 479 IEYFLLTLWTFGISVPSGVFI 499
>Z92789-5|CAB07217.1| 397|Caenorhabditis elegans Hypothetical
protein H02I12.3 protein.
Length = 397
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 109 RLKYILLCLWNFGIDIVIKIFIEKE 183
RL+YI+ CLW + V F+ KE
Sbjct: 163 RLRYIVFCLWFVPLLFVFGWFVAKE 187
>Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 348 WYPPNYTHQVTPTYTSDLTHNRLPRF-SVQDRLRQAQ 455
W PP + + Y S L +N +PR S ++LR+ Q
Sbjct: 159 WVPPGLSRKKVEEYMSQLPNNVVPRTNSNGEKLREKQ 195
>Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 348 WYPPNYTHQVTPTYTSDLTHNRLPRF-SVQDRLRQAQ 455
W PP + + Y S L +N +PR S ++LR+ Q
Sbjct: 196 WVPPGLSRKKVEEYMSQLPNNVVPRTNSNGEKLREKQ 232
>Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 348 WYPPNYTHQVTPTYTSDLTHNRLPRF-SVQDRLRQAQ 455
W PP + + Y S L +N +PR S ++LR+ Q
Sbjct: 196 WVPPGLSRKKVEEYMSQLPNNVVPRTNSNGEKLREKQ 232
>Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 348 WYPPNYTHQVTPTYTSDLTHNRLPRF-SVQDRLRQAQ 455
W PP + + Y S L +N +PR S ++LR+ Q
Sbjct: 104 WVPPGLSRKKVEEYMSQLPNNVVPRTNSNGEKLREKQ 140
>Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 348 WYPPNYTHQVTPTYTSDLTHNRLPRF-SVQDRLRQAQ 455
W PP + + Y S L +N +PR S ++LR+ Q
Sbjct: 159 WVPPGLSRKKVEEYMSQLPNNVVPRTNSNGEKLREKQ 195
>Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 348 WYPPNYTHQVTPTYTSDLTHNRLPRF-SVQDRLRQAQ 455
W PP + + Y S L +N +PR S ++LR+ Q
Sbjct: 196 WVPPGLSRKKVEEYMSQLPNNVVPRTNSNGEKLREKQ 232
>Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 348 WYPPNYTHQVTPTYTSDLTHNRLPRF-SVQDRLRQAQ 455
W PP + + Y S L +N +PR S ++LR+ Q
Sbjct: 196 WVPPGLSRKKVEEYMSQLPNNVVPRTNSNGEKLREKQ 232
>Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 348 WYPPNYTHQVTPTYTSDLTHNRLPRF-SVQDRLRQAQ 455
W PP + + Y S L +N +PR S ++LR+ Q
Sbjct: 104 WVPPGLSRKKVEEYMSQLPNNVVPRTNSNGEKLREKQ 140
>EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform
protein.
Length = 656
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 348 WYPPNYTHQVTPTYTSDLTHNRLPRF-SVQDRLRQAQ 455
W PP + + Y S L +N +PR S ++LR+ Q
Sbjct: 196 WVPPGLSRKKVEEYMSQLPNNVVPRTNSNGEKLREKQ 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,775,481
Number of Sequences: 27780
Number of extensions: 179734
Number of successful extensions: 509
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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