Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_E16
(455 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical... 30 0.92
AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical... 30 0.92
AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 30 0.92
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 28 3.7
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 28 3.7
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 28 3.7
AC024200-3|AAF36007.1| 305|Caenorhabditis elegans Hypothetical ... 28 3.7
Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical p... 27 6.5
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 27 6.5
AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical ... 27 6.5
U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical pr... 27 8.6
>AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical
protein Y39E4B.3c protein.
Length = 304
Score = 29.9 bits (64), Expect = 0.92
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 355 ASQITSTTFPSTTNQRRSSPDAVT--SRACTTP 447
A Q T+TT P+TT+ +SPD T S + TTP
Sbjct: 197 AQQSTTTTTPTTTSTTTASPDGSTTISPSSTTP 229
>AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical
protein Y39E4B.3b protein.
Length = 307
Score = 29.9 bits (64), Expect = 0.92
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 355 ASQITSTTFPSTTNQRRSSPDAVT--SRACTTP 447
A Q T+TT P+TT+ +SPD T S + TTP
Sbjct: 197 AQQSTTTTTPTTTSTTTASPDGSTTISPSSTTP 229
>AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 29.9 bits (64), Expect = 0.92
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 355 ASQITSTTFPSTTNQRRSSPDAVT--SRACTTP 447
A Q T+TT P+TT+ +SPD T S + TTP
Sbjct: 197 AQQSTTTTTPTTTSTTTASPDGSTTISPSSTTP 229
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 367 TSTTFPSTTNQRRSSPDAVTSRACTTP 447
T+TT P+TT Q + P T+ TTP
Sbjct: 254 TTTTTPTTTTQTTTKPTTTTTTPTTTP 280
>Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 139 SDSTRHLP*GTSSRGESARTSLRSTP 216
S S++H P GTSS G S +S+ STP
Sbjct: 560 SSSSQHQP-GTSSSGPSTSSSIASTP 584
>Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 139 SDSTRHLP*GTSSRGESARTSLRSTP 216
S S++H P GTSS G S +S+ STP
Sbjct: 560 SSSSQHQP-GTSSSGPSTSSSIASTP 584
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 56 SDF-YTTRRPYRSSYSVTAELIYRPTSRSVTRLVTYPEAPHH 178
SDF Y T Y ++ T L+Y ++ Y + PHH
Sbjct: 840 SDFLYNTNDKYLTNSDTTNRLVYNGIMNHPNQMSVYQQHPHH 881
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 56 SDF-YTTRRPYRSSYSVTAELIYRPTSRSVTRLVTYPEAPHH 178
SDF Y T Y ++ T L+Y ++ Y + PHH
Sbjct: 842 SDFLYNTNDKYLTNSDTTNRLVYNGIMNHPNQMSVYQQHPHH 883
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 56 SDF-YTTRRPYRSSYSVTAELIYRPTSRSVTRLVTYPEAPHH 178
SDF Y T Y ++ T L+Y ++ Y + PHH
Sbjct: 840 SDFLYNTNDKYLTNSDTTNRLVYNGIMNHPNQMSVYQQHPHH 881
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 56 SDF-YTTRRPYRSSYSVTAELIYRPTSRSVTRLVTYPEAPHH 178
SDF Y T Y ++ T L+Y ++ Y + PHH
Sbjct: 842 SDFLYNTNDKYLTNSDTTNRLVYNGIMNHPNQMSVYQQHPHH 883
>AC024200-3|AAF36007.1| 305|Caenorhabditis elegans Hypothetical
protein Y71F9AL.12 protein.
Length = 305
Score = 27.9 bits (59), Expect = 3.7
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +1
Query: 10 QSNDNTN*PTNHGVRE*LLHDPPSVQEQLQRNGGTDISSDVSLSDSTRHLP*GTSSRGES 189
Q+ D T H R L D P+ E IS D+ L +T++L S GE+
Sbjct: 217 QNPDATIPAPQHAERVNLSPDSPTTTEGTTNQDDVSISVDIDLVCATKNLGENGGSSGEN 276
Query: 190 ARTSL 204
R L
Sbjct: 277 ERKIL 281
>Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 367 TSTTFPSTTNQRRSSPDAVTSRACTTPV 450
T+TT PSTT SS + T+ TT +
Sbjct: 136 TTTTIPSTTTMTESSSTSTTASPTTTRI 163
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +2
Query: 56 SDFYTTRRPYRSSYSVTAELIYRPTSRSVTRLVTYPE 166
+ Y + P ++ Y + Y P + TR TYPE
Sbjct: 193 TSLYNPQPPPKTGYPTNPRVPYNPPQPNYTRQPTYPE 229
>AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 367 TSTTFPSTTNQRRSSPDAVTSRACTTPV 450
T+TT PSTT SS + T+ TT +
Sbjct: 136 TTTTIPSTTTMTESSSTSTTASPTTTRI 163
>U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical
protein F20A1.4 protein.
Length = 580
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 120 IVRRLAQ*LDSSLTLRHLITW*ECAYVPP*YSVSWTASRTAAAQLSLCQLSM 275
IVR L +D SL + L+T CA + P S+ + ++T ++LC L++
Sbjct: 145 IVRLLLATVDKSLPM--LLTTSTCASIIPLVSIIVSPAKTIIPSVTLCVLNL 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,575,591
Number of Sequences: 27780
Number of extensions: 180293
Number of successful extensions: 619
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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