Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_E15
(363 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z37139-11|CAO82010.1| 487|Caenorhabditis elegans Hypothetical p... 28 2.3
Z34799-9|CAO82035.1| 487|Caenorhabditis elegans Hypothetical pr... 28 2.3
AY661556-1|AAV70493.1| 714|Caenorhabditis elegans acetylcholine... 28 2.3
AF078786-4|AAC26944.4| 714|Caenorhabditis elegans Sodium:neurot... 28 2.3
U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical pr... 27 3.0
U28738-6|AAT92056.1| 274|Caenorhabditis elegans Hypothetical pr... 27 3.0
U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 26 9.3
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 26 9.3
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 26 9.3
U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned expre... 26 9.3
U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned expre... 26 9.3
U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned expre... 26 9.3
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +3
Query: 36 KRDAEAASTGNAFSEIEKQFVEIKKQVQENFKPDNVKKQFNNMVDDFNKFMSSMNPNS 209
K D E S N E+E E+K Q QEN + +K F N DDF + P +
Sbjct: 1127 KHDEEKDSEKNVVDEME----EVKDQEQENDECIESEKTFENQ-DDFEVLEDTSAPEA 1179
>Z37139-11|CAO82010.1| 487|Caenorhabditis elegans Hypothetical
protein F34D10.9 protein.
Length = 487
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +3
Query: 51 AASTGNAFSEIEKQFVEIKKQVQENFKPDNVKKQFNNMVDDFNKFMSSMNPNSEA 215
AA+ N F++ ++ + + +++F+ K + N ++DFNKF++S + EA
Sbjct: 176 AANPLNCFTKPDEDLSSLARYRRKSFR----KLRLNFQMEDFNKFLTSRPSDVEA 226
>Z34799-9|CAO82035.1| 487|Caenorhabditis elegans Hypothetical
protein F34D10.9 protein.
Length = 487
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +3
Query: 51 AASTGNAFSEIEKQFVEIKKQVQENFKPDNVKKQFNNMVDDFNKFMSSMNPNSEA 215
AA+ N F++ ++ + + +++F+ K + N ++DFNKF++S + EA
Sbjct: 176 AANPLNCFTKPDEDLSSLARYRRKSFR----KLRLNFQMEDFNKFLTSRPSDVEA 226
>AY661556-1|AAV70493.1| 714|Caenorhabditis elegans
acetylcholine/choline transporter protein.
Length = 714
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -3
Query: 208 ELGFMLLINLLKSSTMLLNCFLTLSGLKFSCTCFLISTNCFSI 80
++ +L+++++ S L+ C LT S + F+C F IS + F I
Sbjct: 367 DIWLVLIVDVIVS---LVGCLLTFSAIGFTCYEFAISLDKFHI 406
>AF078786-4|AAC26944.4| 714|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 6
protein.
Length = 714
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -3
Query: 208 ELGFMLLINLLKSSTMLLNCFLTLSGLKFSCTCFLISTNCFSI 80
++ +L+++++ S L+ C LT S + F+C F IS + F I
Sbjct: 367 DIWLVLIVDVIVS---LVGCLLTFSAIGFTCYEFAISLDKFHI 406
>U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical
protein T28D9.3a protein.
Length = 341
Score = 27.5 bits (58), Expect = 3.0
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = -3
Query: 262 NSYIGIIIISVFFYFGASELGFMLLINL 179
N+++ ++ + + YFG S++GF++ I L
Sbjct: 112 NNHLHVLFVRLLTYFGYSQIGFVMNIAL 139
>U28738-6|AAT92056.1| 274|Caenorhabditis elegans Hypothetical
protein T28D9.3c protein.
Length = 274
Score = 27.5 bits (58), Expect = 3.0
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = -3
Query: 262 NSYIGIIIISVFFYFGASELGFMLLINL 179
N+++ ++ + + YFG S++GF++ I L
Sbjct: 113 NNHLHVLFVRLLTYFGYSQIGFVMNIAL 140
>U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical
protein T28D9.3b protein.
Length = 342
Score = 27.5 bits (58), Expect = 3.0
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = -3
Query: 262 NSYIGIIIISVFFYFGASELGFMLLINL 179
N+++ ++ + + YFG S++GF++ I L
Sbjct: 113 NNHLHVLFVRLLTYFGYSQIGFVMNIAL 140
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 93 FVEIKKQVQENFKPDNVKKQFNNMVDDFNKFMSSMN 200
F+E+ K+V+EN + +Q+N V D +K + ++
Sbjct: 37 FIEVSKEVRENNLQGDFDEQYNCHVLDEDKLLDHIS 72
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 78 EIEKQFVEIKKQVQENFKPDNVKKQFNNMVDDFNKFMSSMN 200
++E+ KK+VQE + V + ++ D+F MSS+N
Sbjct: 431 QLEQDLELQKKRVQELTEQRKVLESKASVADEFGTLMSSLN 471
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 78 EIEKQFVEIKKQVQENFKPDNVKKQFNNMVDDFNKFMSSMN 200
++E+ KK+VQE + V + ++ D+F MSS+N
Sbjct: 431 QLEQDLELQKKRVQELTEQRKVLESKASVADEFGTLMSSLN 471
>U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned
expression site protein22, isoform c protein.
Length = 710
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 205 LGFMLLINLLKSSTMLLNCFLTLSGL 128
L M+ +NLLK+ TM++ C L G+
Sbjct: 499 LSEMIDLNLLKNKTMMILCISNLLGM 524
>U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned
expression site protein22, isoform a protein.
Length = 677
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 205 LGFMLLINLLKSSTMLLNCFLTLSGL 128
L M+ +NLLK+ TM++ C L G+
Sbjct: 444 LSEMIDLNLLKNKTMMILCISNLLGM 469
>U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned
expression site protein22, isoform b protein.
Length = 777
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 205 LGFMLLINLLKSSTMLLNCFLTLSGL 128
L M+ +NLLK+ TM++ C L G+
Sbjct: 499 LSEMIDLNLLKNKTMMILCISNLLGM 524
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,904,126
Number of Sequences: 27780
Number of extensions: 70602
Number of successful extensions: 365
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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