Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_E11
         (360 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80017-2|AAC52047.1| 1403|Homo sapiens neuronal apoptosis inhibi...    29   5.7  
U19251-1|AAC52045.1| 1403|Homo sapiens neuronal apoptosis inhibi...    29   5.7  
BT006663-1|AAP35309.1|  685|Homo sapiens midline 2 protein.            28   7.6  
BC017707-1|AAH17707.1|  685|Homo sapiens midline 2 protein.            28   7.6  
AY625004-1|AAT48105.1|  685|Homo sapiens TRIM1 beta protein.           28   7.6  
AL109946-4|CAO72054.1|  685|Homo sapiens midline 2 protein.            28   7.6  
AL034399-3|CAI42074.1|  685|Homo sapiens midline 2 protein.            28   7.6  
AF196481-1|AAF07341.1|  685|Homo sapiens RING finger protein pro...    28   7.6  

>U80017-2|AAC52047.1| 1403|Homo sapiens neuronal apoptosis
           inhibitory protein protein.
          Length = 1403

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = -2

Query: 185 LVVFVPYSPHSGRVG---TPAQFYYTRARAGIQC 93
           L  FV Y P+S  +      A FY+T  ++GIQC
Sbjct: 64  LKTFVTYEPYSSWIPQEMAAAGFYFTGVKSGIQC 97


>U19251-1|AAC52045.1| 1403|Homo sapiens neuronal apoptosis
           inhibitory protein protein.
          Length = 1403

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = -2

Query: 185 LVVFVPYSPHSGRVG---TPAQFYYTRARAGIQC 93
           L  FV Y P+S  +      A FY+T  ++GIQC
Sbjct: 64  LKTFVTYEPYSSWIPQEMAAAGFYFTGVKSGIQC 97


>BT006663-1|AAP35309.1|  685|Homo sapiens midline 2 protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 195 DNYSCGFCALFATQRTGRDASAILLYES-SCWHPVPSAV*QNHQTIHG 55
           D +S     L  T  TG+ A+ I LY S   W  VP+ + QNH T+HG
Sbjct: 407 DEFSISSYELQYTIFTGQ-ANFISLYNSVDSWMIVPN-IKQNHYTVHG 452


>BC017707-1|AAH17707.1|  685|Homo sapiens midline 2 protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 195 DNYSCGFCALFATQRTGRDASAILLYES-SCWHPVPSAV*QNHQTIHG 55
           D +S     L  T  TG+ A+ I LY S   W  VP+ + QNH T+HG
Sbjct: 407 DEFSISSYELQYTIFTGQ-ANFISLYNSVDSWMIVPN-IKQNHYTVHG 452


>AY625004-1|AAT48105.1|  685|Homo sapiens TRIM1 beta protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 195 DNYSCGFCALFATQRTGRDASAILLYES-SCWHPVPSAV*QNHQTIHG 55
           D +S     L  T  TG+ A+ I LY S   W  VP+ + QNH T+HG
Sbjct: 407 DEFSISSYELQYTIFTGQ-ANFISLYNSVDSWMIVPN-IKQNHYTVHG 452


>AL109946-4|CAO72054.1|  685|Homo sapiens midline 2 protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 195 DNYSCGFCALFATQRTGRDASAILLYES-SCWHPVPSAV*QNHQTIHG 55
           D +S     L  T  TG+ A+ I LY S   W  VP+ + QNH T+HG
Sbjct: 407 DEFSISSYELQYTIFTGQ-ANFISLYNSVDSWMIVPN-IKQNHYTVHG 452


>AL034399-3|CAI42074.1|  685|Homo sapiens midline 2 protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 195 DNYSCGFCALFATQRTGRDASAILLYES-SCWHPVPSAV*QNHQTIHG 55
           D +S     L  T  TG+ A+ I LY S   W  VP+ + QNH T+HG
Sbjct: 407 DEFSISSYELQYTIFTGQ-ANFISLYNSVDSWMIVPN-IKQNHYTVHG 452


>AF196481-1|AAF07341.1|  685|Homo sapiens RING finger protein
           protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 195 DNYSCGFCALFATQRTGRDASAILLYES-SCWHPVPSAV*QNHQTIHG 55
           D +S     L  T  TG+ A+ I LY S   W  VP+ + QNH T+HG
Sbjct: 407 DEFSISSYELQYTIFTGQ-ANFISLYNSVDSWMIVPN-IKQNHYTVHG 452


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,470,009
Number of Sequences: 237096
Number of extensions: 916226
Number of successful extensions: 1347
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)