Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_E11
         (360 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   2.5  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   2.5  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   4.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   7.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   7.7  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -1

Query: 198 YDNYSCGFCALFATQRTGRDASAILLYESSC 106
           Y  YSC  C  F  +   +D S     E SC
Sbjct: 122 YGVYSCEGCKGFFKRTVRKDLSYACREEKSC 152


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -1

Query: 198 YDNYSCGFCALFATQRTGRDASAILLYESSC 106
           Y  YSC  C  F  +   +D S     E SC
Sbjct: 122 YGVYSCEGCKGFFKRTVRKDLSYACREEKSC 152


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 171 HKNHKNNYHKSCLSRFY 221
           + N+K NY+ +C   +Y
Sbjct: 93  NNNYKYNYNNNCKKLYY 109


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +1

Query: 67  LMILSHSGWHWMP 105
           ++ + H+G +WMP
Sbjct: 804 VVFVCHNGMNWMP 816


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 104 QHELSYSKIALASRPVRCVANKAQKPQ 184
           QH  S   + L S P R  +++AQ  Q
Sbjct: 665 QHTQSQLHLHLTSPPARSPSSQAQASQ 691


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,857
Number of Sequences: 438
Number of extensions: 1931
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)