Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_E10
         (339 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    29   0.85 
Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr...    28   2.0  
AL117204-42|CAB55146.2|  714|Caenorhabditis elegans Hypothetical...    27   4.5  
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr...    26   6.0  
AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical...    26   7.9  

>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
            W02C12.1 protein.
          Length = 1372

 Score = 29.1 bits (62), Expect = 0.85
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 204  KVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVTC 308
            KV  NG  D G  +I ++Y C  G    +D  V C
Sbjct: 902  KVLPNGRPDVGSLKIKEEYLCQAGQVVVRDLCVPC 936


>Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical
           protein B0024.8 protein.
          Length = 1185

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 102 LVQELRRQGFDESLMSNWVCLVEN 173
           L+ EL      E + SNW CLVEN
Sbjct: 159 LITELHHILIPELVKSNWTCLVEN 182


>AL117204-42|CAB55146.2|  714|Caenorhabditis elegans Hypothetical
           protein Y116A8C.4 protein.
          Length = 714

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 171 NESG-RFTDKIGKVNKNGSRDYGLFQINDKY 260
           NES     + +  + K G R++GLFQI+ KY
Sbjct: 194 NESDFNLNEMLNNLVKLGQRNFGLFQISFKY 224


>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical protein
            F10F2.2 protein.
          Length = 1343

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 96   CGLVQELRRQGFDESLMSNWVCLVENESGRFTDKIG--KVNKNGS 224
            C L+ +L   G DE      V L ENE GRF    G  K+ KN S
Sbjct: 1168 CQLMAQLGWIG-DEEQKGPTVFLDENECGRFDSSFGPVKIEKNVS 1211


>AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.2 protein.
          Length = 1140

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +3

Query: 165 VENESGRFTDKIGKVNKNGSRDY-GLFQ 245
           ++ E+G F   +  VN N   DY G+FQ
Sbjct: 810 IKKEAGTFIQSVAPVNSNKLSDYSGIFQ 837


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,466,991
Number of Sequences: 27780
Number of extensions: 134808
Number of successful extensions: 359
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)