Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_E08
         (322 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPACUNK4.17 |||NAD binding dehydrogenase family protein|Schizosa...    25   2.1  
SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual      25   2.1  
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce...    25   2.1  
SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy...    24   5.0  
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos...    24   5.0  
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po...    24   5.0  
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo...    23   8.7  

>SPACUNK4.17 |||NAD binding dehydrogenase family
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 405

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 149 GSYSGPWVNSEVLATVMSIVVAYVALRNKNK 241
           G+  GPW NS+ L  V+   +  VAL + +K
Sbjct: 48  GTAEGPWNNSQKLELVLGHRLQVVALLSPHK 78


>SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 324

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +2

Query: 176 SEVLATVMSIVVAYVALRNKNKILA*FVDCN*VFFV 283
           +++L T++ I+ AY+AL     ++  FV  + +FF+
Sbjct: 255 ADMLMTLVLIISAYIALNAVASVVIAFVFLSLIFFI 290


>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 522

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2

Query: 126 SNGATVAVGSERRARRSDAQPSSSR 52
           SN  T  +GSERR R  +A   SSR
Sbjct: 157 SNFRTFDIGSERRRRILEASQDSSR 181


>SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 357

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 51  SWMRRVGRHSAALVAPTR 104
           SW R++   SA ++APT+
Sbjct: 168 SWERKIMHRSAEIIAPTK 185


>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
           Plc1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 899

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 77  LRRARRSDPTATVAPLLAIQLH 142
           LRRAR    + T++P + IQ+H
Sbjct: 780 LRRARELSNSETLSPYVEIQVH 801


>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 851

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 246 RILFLFLRATYATTIDITVARTSELT 169
           R+L  FL+ +  T +  TVAR+ EL+
Sbjct: 576 RLLLAFLKPSLMTYVRSTVARSMELS 601


>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
            Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1530

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 51   SWMRRVGRHSAALVAPTRLPLLLHYSLFNSII 146
            S +R   R SAAL  P  +PL   Y    S+I
Sbjct: 972  STVREALRFSAALRQPASVPLSEKYEYVESVI 1003


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,205,726
Number of Sequences: 5004
Number of extensions: 21279
Number of successful extensions: 54
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 88030718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)