Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_E08
(322 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69043-1|CAA93157.1| 173|Homo sapiens translocon-associated pro... 70 1e-12
Z68129-2|CAA92215.1| 173|Homo sapiens translocon-associated pro... 70 1e-12
X90583-1|CAA62211.1| 173|Homo sapiens protein ( H.sapiens mRNA ... 70 1e-12
BT007192-1|AAP35856.1| 173|Homo sapiens signal sequence recepto... 70 1e-12
BC003371-1|AAH03371.1| 173|Homo sapiens signal sequence recepto... 70 1e-12
AK026711-1|BAB15535.1| 180|Homo sapiens protein ( Homo sapiens ... 30 1.3
BC041369-1|AAH41369.1| 365|Homo sapiens sphingomyelin synthase ... 29 4.1
BC028705-1|AAH28705.1| 365|Homo sapiens MGC26963 protein protein. 29 4.1
AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein. 29 4.1
AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein. 29 4.1
AL451164-7|CAI39996.1| 258|Homo sapiens pitrilysin metallopepti... 28 7.2
X14008-1|CAA32175.1| 130|Homo sapiens lysozyme protein. 27 9.5
U25677-1|AAC63078.1| 148|Homo sapiens lysozyme precursor protein. 27 9.5
M21119-1|AAA36188.1| 148|Homo sapiens protein ( Human lysozyme ... 27 9.5
M19045-1|AAA59536.1| 148|Homo sapiens LYZ protein. 27 9.5
J03801-1|AAA59535.1| 148|Homo sapiens LYZ protein. 27 9.5
BC004147-1|AAH04147.1| 148|Homo sapiens lysozyme (renal amyloid... 27 9.5
AK131414-1|BAD18561.1| 493|Homo sapiens protein ( Homo sapiens ... 27 9.5
>Z69043-1|CAA93157.1| 173|Homo sapiens translocon-associated
protein delta subunit precursor protein.
Length = 173
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/84 (34%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 WTEEPAKARSGVHEINILDEEGWASLRRARRS-DPTATVAPLLAIQLHHPGSYSGPWVNS 178
W+ + A +G +E+ DEE ++ LR+A+R+ + + + PL + + H G+++GPWV++
Sbjct: 90 WSLDHKSAHAGTYEVRFFDEESYSLLRKAQRNNEDISIIPPLFTVSVDHRGTWNGPWVST 149
Query: 179 EVLATVMSIVVAYVALRNKNKILA 250
EVLA + +V+ Y+A K+ I A
Sbjct: 150 EVLAAAIGLVIYYLAFSAKSHIQA 173
>Z68129-2|CAA92215.1| 173|Homo sapiens translocon-associated
protein delta subunit precursor protein.
Length = 173
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/84 (34%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 WTEEPAKARSGVHEINILDEEGWASLRRARRS-DPTATVAPLLAIQLHHPGSYSGPWVNS 178
W+ + A +G +E+ DEE ++ LR+A+R+ + + + PL + + H G+++GPWV++
Sbjct: 90 WSLDHKSAHAGTYEVRFFDEESYSLLRKAQRNNEDISIIPPLFTVSVDHRGTWNGPWVST 149
Query: 179 EVLATVMSIVVAYVALRNKNKILA 250
EVLA + +V+ Y+A K+ I A
Sbjct: 150 EVLAAAIGLVIYYLAFSAKSHIQA 173
>X90583-1|CAA62211.1| 173|Homo sapiens protein ( H.sapiens mRNA for
rat translocon-associated protein delta homolog. ).
Length = 173
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/84 (34%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 WTEEPAKARSGVHEINILDEEGWASLRRARRS-DPTATVAPLLAIQLHHPGSYSGPWVNS 178
W+ + A +G +E+ DEE ++ LR+A+R+ + + + PL + + H G+++GPWV++
Sbjct: 90 WSLDHKSAHAGTYEVRFFDEESYSLLRKAQRNNEDISIIPPLFTVSVDHRGTWNGPWVST 149
Query: 179 EVLATVMSIVVAYVALRNKNKILA 250
EVLA + +V+ Y+A K+ I A
Sbjct: 150 EVLAAAIGLVIYYLAFSAKSHIQA 173
>BT007192-1|AAP35856.1| 173|Homo sapiens signal sequence receptor,
delta (translocon-associated protein delta) protein.
Length = 173
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/84 (34%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 WTEEPAKARSGVHEINILDEEGWASLRRARRS-DPTATVAPLLAIQLHHPGSYSGPWVNS 178
W+ + A +G +E+ DEE ++ LR+A+R+ + + + PL + + H G+++GPWV++
Sbjct: 90 WSLDHKSAHAGTYEVRFFDEESYSLLRKAQRNNEDISIIPPLFTVSVDHRGTWNGPWVST 149
Query: 179 EVLATVMSIVVAYVALRNKNKILA 250
EVLA + +V+ Y+A K+ I A
Sbjct: 150 EVLAAAIGLVIYYLAFSAKSHIQA 173
>BC003371-1|AAH03371.1| 173|Homo sapiens signal sequence receptor,
delta (translocon-associated protein delta) protein.
Length = 173
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/84 (34%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 WTEEPAKARSGVHEINILDEEGWASLRRARRS-DPTATVAPLLAIQLHHPGSYSGPWVNS 178
W+ + A +G +E+ DEE ++ LR+A+R+ + + + PL + + H G+++GPWV++
Sbjct: 90 WSLDHKSAHAGTYEVRFFDEESYSLLRKAQRNNEDISIIPPLFTVSVDHRGTWNGPWVST 149
Query: 179 EVLATVMSIVVAYVALRNKNKILA 250
EVLA + +V+ Y+A K+ I A
Sbjct: 150 EVLAAAIGLVIYYLAFSAKSHIQA 173
>AK026711-1|BAB15535.1| 180|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23058 fis, clone LNG03818. ).
Length = 180
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 107 QSGRSDERGGVTPNPPHPGC*FHELRSGP 21
+SG E+GG P+PP P +H +GP
Sbjct: 73 ESGLHPEQGGAGPSPPSPSPPWHTREAGP 101
>BC041369-1|AAH41369.1| 365|Homo sapiens sphingomyelin synthase 2
protein.
Length = 365
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 145 SWQLLWPLG*FRSSCYGY 198
SW L WP G F+SSC Y
Sbjct: 334 SWPLSWPPGCFKSSCKKY 351
>BC028705-1|AAH28705.1| 365|Homo sapiens MGC26963 protein protein.
Length = 365
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 145 SWQLLWPLG*FRSSCYGY 198
SW L WP G F+SSC Y
Sbjct: 334 SWPLSWPPGCFKSSCKKY 351
>AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein.
Length = 1089
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 170 PRGQSNCQDDGVE*RVMEQQWQSGRSDERGGVTPNPPHPG 51
PR + QDD + ++ SG+ DE GG + + H G
Sbjct: 331 PRRRRRAQDDSQRRSLPAEEGSSGKKDEGGGGSSSQDHGG 370
>AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein.
Length = 1450
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 170 PRGQSNCQDDGVE*RVMEQQWQSGRSDERGGVTPNPPHPG 51
PR + QDD + ++ SG+ DE GG + + H G
Sbjct: 692 PRRRRRAQDDSQRRSLPAEEGSSGKKDEGGGGSSSQDHGG 731
>AL451164-7|CAI39996.1| 258|Homo sapiens pitrilysin
metallopeptidase 1 protein.
Length = 258
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 55 G*GGLGVTPPRSSLRPDCHCCSITRYSTP 141
G G LG+ PR+S R C CC + + P
Sbjct: 221 GSGDLGLISPRASSRSLCLCCRPSHHCLP 249
>X14008-1|CAA32175.1| 130|Homo sapiens lysozyme protein.
Length = 130
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 199 HNRSKNF*INPGARVTAR-MMELNSE*WSNSGSRVGATSAAE*RPTLLIQD 50
+ R+ N+ N G R T + ++NS W N G GA +A + L+QD
Sbjct: 39 NTRATNY--NAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQD 87
>U25677-1|AAC63078.1| 148|Homo sapiens lysozyme precursor protein.
Length = 148
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 199 HNRSKNF*INPGARVTAR-MMELNSE*WSNSGSRVGATSAAE*RPTLLIQD 50
+ R+ N+ N G R T + ++NS W N G GA +A + L+QD
Sbjct: 57 NTRATNY--NAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQD 105
>M21119-1|AAA36188.1| 148|Homo sapiens protein ( Human lysozyme
mRNA, complete cds. ).
Length = 148
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 199 HNRSKNF*INPGARVTAR-MMELNSE*WSNSGSRVGATSAAE*RPTLLIQD 50
+ R+ N+ N G R T + ++NS W N G GA +A + L+QD
Sbjct: 57 NTRATNY--NAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQD 105
>M19045-1|AAA59536.1| 148|Homo sapiens LYZ protein.
Length = 148
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 199 HNRSKNF*INPGARVTAR-MMELNSE*WSNSGSRVGATSAAE*RPTLLIQD 50
+ R+ N+ N G R T + ++NS W N G GA +A + L+QD
Sbjct: 57 NTRATNY--NAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQD 105
>J03801-1|AAA59535.1| 148|Homo sapiens LYZ protein.
Length = 148
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 199 HNRSKNF*INPGARVTAR-MMELNSE*WSNSGSRVGATSAAE*RPTLLIQD 50
+ R+ N+ N G R T + ++NS W N G GA +A + L+QD
Sbjct: 57 NTRATNY--NAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQD 105
>BC004147-1|AAH04147.1| 148|Homo sapiens lysozyme (renal
amyloidosis) protein.
Length = 148
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 199 HNRSKNF*INPGARVTAR-MMELNSE*WSNSGSRVGATSAAE*RPTLLIQD 50
+ R+ N+ N G R T + ++NS W N G GA +A + L+QD
Sbjct: 57 NTRATNY--NAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQD 105
>AK131414-1|BAD18561.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ16524 fis, clone OCBBF2003327, moderately
similar to ADAM-TS 6 precursor (EC 3.4.24.-). ).
Length = 493
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 59 EEGWASLRRARRSDPTATVAPLLAIQLHHPGSYSG 163
E G L A + P A PLLA+ PG SG
Sbjct: 39 EPGGRGLHGATAAGPVAAACPLLAVTATAPGQPSG 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,715,339
Number of Sequences: 237096
Number of extensions: 966085
Number of successful extensions: 10556
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10556
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -