Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_E03
(206 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 113 7e-26
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 113 7e-26
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 113 7e-26
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 113 7e-26
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 88 6e-18
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 71 9e-13
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 34 0.096
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 34 0.096
BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein ... 28 4.8
BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein ... 28 4.8
BC060864-1|AAH60864.1| 607|Homo sapiens UDP-N-acetyl-alpha-D-ga... 28 6.3
BC037341-1|AAH37341.3| 607|Homo sapiens UDP-N-acetyl-alpha-D-ga... 28 6.3
AJ626724-1|CAF25035.1| 607|Homo sapiens GalNAc-transferase 18 p... 28 6.3
AB078147-1|BAD93179.1| 607|Homo sapiens UDP-N-acetyl-alpha-D-ga... 28 6.3
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 113 bits (273), Expect = 7e-26
Identities = 52/69 (75%), Positives = 64/69 (92%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 GVLRVNGRPLDC-KPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAIS 178
G+++VNGRPL+ +PR LQYKL EP+LLLGKE+F+GVDIRV VKGGGHVAQ+YAIRQ+IS
Sbjct: 30 GLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSIS 89
Query: 179 KALIAFYQK 205
KAL+A+YQK
Sbjct: 90 KALVAYYQK 98
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 113 bits (273), Expect = 7e-26
Identities = 52/69 (75%), Positives = 64/69 (92%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 GVLRVNGRPLDC-KPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAIS 178
G+++VNGRPL+ +PR LQYKL EP+LLLGKE+F+GVDIRV VKGGGHVAQ+YAIRQ+IS
Sbjct: 30 GLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSIS 89
Query: 179 KALIAFYQK 205
KAL+A+YQK
Sbjct: 90 KALVAYYQK 98
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 113 bits (273), Expect = 7e-26
Identities = 52/69 (75%), Positives = 64/69 (92%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 GVLRVNGRPLDC-KPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAIS 178
G+++VNGRPL+ +PR LQYKL EP+LLLGKE+F+GVDIRV VKGGGHVAQ+YAIRQ+IS
Sbjct: 30 GLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSIS 89
Query: 179 KALIAFYQK 205
KAL+A+YQK
Sbjct: 90 KALVAYYQK 98
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 113 bits (273), Expect = 7e-26
Identities = 52/69 (75%), Positives = 64/69 (92%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 GVLRVNGRPLDC-KPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAIS 178
G+++VNGRPL+ +PR LQYKL EP+LLLGKE+F+GVDIRV VKGGGHVAQ+YAIRQ+IS
Sbjct: 30 GLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSIS 89
Query: 179 KALIAFYQK 205
KAL+A+YQK
Sbjct: 90 KALVAYYQK 98
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 87.8 bits (208), Expect = 6e-18
Identities = 40/59 (67%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 GVLRVNGRPLDC-KPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAI 175
G+++VNGRPL+ +PR LQYKL EP+LLLGKE+F+GVDIRV VKGGGHVAQ+Y Q +
Sbjct: 30 GLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYGESQEL 88
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 70.5 bits (165), Expect = 9e-13
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 GVLRVNGRPLDCKPRL-LQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAIS 178
G +R+N PL+ L LQYKL E LLL KE+ +G+DI V VKG GHV Q+YA+ Q IS
Sbjct: 41 GFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGMDIHVRVKGSGHVVQIYAVLQYIS 100
Query: 179 KALIAFYQK 205
KAL+ Y K
Sbjct: 101 KALVPCYPK 109
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 33.9 bits (74), Expect = 0.096
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 110 DIRVTVKGGGHVAQVYAIRQAISKALIAF 196
D+ TV GGG AQ AIR A++KAL +F
Sbjct: 327 DVTCTVSGGGRSAQAGAIRLAMAKALCSF 355
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 33.9 bits (74), Expect = 0.096
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 110 DIRVTVKGGGHVAQVYAIRQAISKALIAF 196
D+ TV GGG AQ AIR A++KAL +F
Sbjct: 233 DVTCTVSGGGRSAQAGAIRLAMAKALCSF 261
>BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 38 KPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQ 202
KP L K EP L +KF +D+R + + H+ V+ + I + L +YQ
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQ 93
>BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 38 KPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQ 202
KP L K EP L +KF +D+R + + H+ V+ + I + L +YQ
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQ 93
>BC060864-1|AAH60864.1| 607|Homo sapiens
UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferas protein.
Length = 607
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 73 YPFARQGK--VLWCGY*SDCKRWWTCCTGLCNQTSHL*SP 186
YP A QG LWC Y + K WW L N T+ + SP
Sbjct: 293 YPLAAQGFDWELWCRYLNPPKAWWK----LENSTAPIRSP 328
>BC037341-1|AAH37341.3| 607|Homo sapiens
UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferas protein.
Length = 607
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 73 YPFARQGK--VLWCGY*SDCKRWWTCCTGLCNQTSHL*SP 186
YP A QG LWC Y + K WW L N T+ + SP
Sbjct: 293 YPLAAQGFDWELWCRYLNPPKAWWK----LENSTAPIRSP 328
>AJ626724-1|CAF25035.1| 607|Homo sapiens GalNAc-transferase 18
protein.
Length = 607
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 73 YPFARQGK--VLWCGY*SDCKRWWTCCTGLCNQTSHL*SP 186
YP A QG LWC Y + K WW L N T+ + SP
Sbjct: 293 YPLAAQGFDWELWCRYLNPPKAWWK----LENSTAPIRSP 328
>AB078147-1|BAD93179.1| 607|Homo sapiens
UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferas protein.
Length = 607
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 73 YPFARQGK--VLWCGY*SDCKRWWTCCTGLCNQTSHL*SP 186
YP A QG LWC Y + K WW L N T+ + SP
Sbjct: 293 YPLAAQGFDWELWCRYLNPPKAWWK----LENSTAPIRSP 328
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,078,547
Number of Sequences: 237096
Number of extensions: 638740
Number of successful extensions: 1677
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1672
length of database: 76,859,062
effective HSP length: 47
effective length of database: 65,715,550
effective search space used: 1380026550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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