BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_D23
(553 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 367 e-104
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 367 e-104
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 351 2e-99
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 349 8e-99
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 38 9e-05
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 25 0.51
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 2.7
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 3.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 4.8
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 4.8
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 4.8
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 6.3
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 6.3
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 6.3
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 8.3
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 367 bits (903), Expect = e-104
Identities = 172/179 (96%), Positives = 174/179 (97%)
Frame = +2
Query: 2 IALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 181
IALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR
Sbjct: 18 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 77
Query: 182 EHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 361
EHALLAFTLGVKQLIVGVNKMDSTEPPYSE+RFEEIKKEVSSYIKKIGYNPAAVAFVPIS
Sbjct: 78 EHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 137
Query: 362 GWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDV 538
GWHGDNMLE S+KMPWFKGW VERKEGK EGKCLIEALDAILPP RPTDKALRLPLQDV
Sbjct: 138 GWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDV 196
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 367 bits (903), Expect = e-104
Identities = 172/179 (96%), Positives = 174/179 (97%)
Frame = +2
Query: 2 IALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 181
IALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR
Sbjct: 75 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 134
Query: 182 EHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 361
EHALLAFTLGVKQLIVGVNKMDSTEPPYSE+RFEEIKKEVSSYIKKIGYNPAAVAFVPIS
Sbjct: 135 EHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 194
Query: 362 GWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDV 538
GWHGDNMLE S+KMPWFKGW VERKEGK EGKCLIEALDAILPP RPTDKALRLPLQDV
Sbjct: 195 GWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDV 253
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 351 bits (864), Expect = 2e-99
Identities = 164/171 (95%), Positives = 166/171 (97%)
Frame = +2
Query: 2 IALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 181
IALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR
Sbjct: 2 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 61
Query: 182 EHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 361
EHALLAFTLGVKQLIVGVNKMDSTEPPYSE+RFEEIKKEVSSYIKKIGYNPAAVAFVPIS
Sbjct: 62 EHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 121
Query: 362 GWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKA 514
GWHGDNMLE S+KMPWFKGW VERKEGK EGKCLIEALDAILPP RPTDKA
Sbjct: 122 GWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKA 172
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 349 bits (859), Expect = 8e-99
Identities = 163/179 (91%), Positives = 170/179 (94%)
Frame = +2
Query: 2 IALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 181
IALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTR
Sbjct: 75 IALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTR 134
Query: 182 EHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 361
EHALLAFTLGVKQLIVGVNKMD T+PPYSE+RFEEIKKEVSSYIKKIGYN A+VAFVPIS
Sbjct: 135 EHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPIS 194
Query: 362 GWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDV 538
GWHGDNMLEPS K PW+KGW VERK+G A+GK LIEALDAILPP+RPTDKALRLPLQDV
Sbjct: 195 GWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSRPTDKALRLPLQDV 253
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 37.5 bits (83), Expect = 9e-05
Identities = 36/117 (30%), Positives = 52/117 (44%)
Frame = +2
Query: 38 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 217
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 218 QLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 388
+IV +NK+D + ++E K + I+++G + V IS G N+ E
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAKHGI--VIEELG---GEIQCVKISALKGINLRE 298
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 25.0 bits (52), Expect = 0.51
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 339 PSLSYPFLAGTEITC-WSRPPKCHGSRDGWLSVKKE 443
P+L F G + C SRP +C G DG++ KE
Sbjct: 160 PALEEQFATGRVLACISSRPGQC-GREDGYILEGKE 194
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.6 bits (46), Expect = 2.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 343 DGSRIVTNFLDVGRDFL 293
DG R+V F+DV +D +
Sbjct: 531 DGQRLVYQFVDVPKDII 547
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 22.2 bits (45), Expect = 3.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 23 TGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 124
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 4.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 23 TGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 124
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 4.8
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +2
Query: 263 YSESRFEEIKKEVSSYIKKIGYNPAAVAFVPI 358
Y+ S + ++Y KK+ YN + +P+
Sbjct: 89 YNYSNYNNYNNNYNNYNKKLYYNINYIEQIPV 120
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 4.8
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 423 WLSVKKERLKVNALLRPSTPSFRLLAPLTRLSVF 524
W++ E+ K RP LL L RLS++
Sbjct: 3 WINRDGEKWKGKMSQRPLARMLALLVSLHRLSIY 36
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 6.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 444 RLKVNALLRPSTPSFR 491
RL +N +LRP P F+
Sbjct: 274 RLLMNDILRPYVPEFK 289
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 6.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 444 RLKVNALLRPSTPSFR 491
RL +N +LRP P F+
Sbjct: 189 RLLMNDILRPYVPEFK 204
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 6.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 444 RLKVNALLRPSTPSFR 491
RL +N +LRP P F+
Sbjct: 508 RLLMNDILRPYVPEFK 523
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.0 bits (42), Expect = 8.3
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 263 YSESRFEEIKKEVS 304
Y E R+EEI+++ S
Sbjct: 17 YGEDRWEEIRRQAS 30
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,743
Number of Sequences: 438
Number of extensions: 3223
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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